Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01497 ATGTCTTGCTCCATCGCTGTCCCTAACTCTCCAGCTTTCTCTTCTCCTTCTTCTCTGTTCTGCAACAGTGCCATGAACTCTGTTATATCTCCTCCTCCTTCTCCTTCTCCTTCTTCTTCCAGATTTAGGCTCTTGAAGCCTCCAATTGCCTTACCCACTCTGCCGTCTCCTTCTGCTCCGTCGTCATCCTGCTCCTCGCCGACGAACTCCCTCTTGAAGAGGAAGAGACCTACAAGGCTTGATATTCCTGTTGCGTCCTTCGCATTTGGCGCTCCGGCGACGCCGTCTACGGCTGTGGTGAGGGATTTCTTGGAGGCTGAAGGAGATGGGTTTTCTTTGTATTGCAAGAGGGGAAGGAGGGAGTTCATGGAGGACCGTTACTCAGCTACCGTTAATCTCCAAGGAAAAAAAAAGCAGGCTTTCTTTGGAATATTTGATGGGCATGGAGGAGCAAAAGCTGCGGAATTTGCTGCTCTTAACTTGGAAAAGAATGTCTTGAAAGAAGTAATTATGAGGAGTGATAAAGAATACGATGGTGACATTGAAGAGGCAGTGAAACATGGTTACTTGACCACAGATTCGGAGTTCCTAAAGGAGGATGTCCAAGGTGGTTCTTGCTGTGTAACAGCATTGATCAGAGACGGCAACCTCATTGTGTCCAATGTTGGTGATTGTCGTGCCGTCGTTAGCAGAGGTGGCAAAGCCGAGGCCCTTACATCGGATCATCGGCCCTCGAGGGAAGATGAGAGGGACAGAATTGAAGCCCTGGGTGGCTATGTAGATCTATGCCATGGAGTTTGGAGGATCCAAGGATCGCTTGCCGTGTCTCGAGGAATTGGAGATAAACACCTGAAGCAATGGGTGACAGCAGAACCTGAGACTAAAATTCTCAAAATTGAAGCTGAACATGACTTGTTAATACTAGCTTCAGACGGATTATGGGATAAGGTTTCTAATCAGGAAGCAGTGGATATTGTTCGTTCTTTTTGTGTAGAGAGTGATAAGCCACAGCCACTATTGTTGGCCTGTAAAAAGCTTGTAGACTTGTCAGCTTCACGAGGCTCTTTTGACGATATAAGCGTTATGGTAATCAAGTTGGATCAATATATATGA 1113 0.4672 MSCSIAVPNSPAFSSPSSLFCNSAMNSVISPPPSPSPSSSRFRLLKPPIALPTLPSPSAPSSSCSSPTNSLLKRKRPTRLDIPVASFAFGAPATPSTAVVRDFLEAEGDGFSLYCKRGRREFMEDRYSATVNLQGKKKQAFFGIFDGHGGAKAAEFAALNLEKNVLKEVIMRSDKEYDGDIEEAVKHGYLTTDSEFLKEDVQGGSCCVTALIRDGNLIVSNVGDCRAVVSRGGKAEALTSDHRPSREDERDRIEALGGYVDLCHGVWRIQGSLAVSRGIGDKHLKQWVTAEPETKILKIEAEHDLLILASDGLWDKVSNQEAVDIVRSFCVESDKPQPLLLACKKLVDLSASRGSFDDISVMVIKLDQYI 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01497 370 FunFam probable protein phosphatase 2C 25 103 369 - -
Accr4g01497 370 ProSitePatterns PPM-type phosphatase domain signature. 141 149 IPR000222 GO:0043169
Accr4g01497 370 SMART PP2C_4 100 364 IPR001932 -
Accr4g01497 370 Gene3D - 105 370 IPR036457 -
Accr4g01497 370 MobiDBLite consensus disorder prediction 53 72 - -
Accr4g01497 370 Pfam Protein phosphatase 2C 113 358 IPR001932 -
Accr4g01497 370 ProSiteProfiles PPM-type phosphatase domain profile. 110 366 IPR001932 -
Accr4g01497 370 SMART PP2C_SIG_2 118 366 IPR001932 -
Accr4g01497 370 PANTHER PROTEIN PHOSPHATASE 2C 73 365 IPR015655 GO:0004722|GO:0006470
Accr4g01497 370 MobiDBLite consensus disorder prediction 56 72 - -
Accr4g01497 370 CDD PP2Cc 110 366 IPR001932 -
Accr4g01497 370 SUPERFAMILY PP2C-like 110 367 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01497 Accr-Chr4 15138869 15140534 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01497 1 370 PP2C-type Phosphatase Gene Family AT2G30020 60.199 4.30e-158 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01497 K17506 - gmx:100797934 493.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr4g01497 4 15138869 15140534 Accr3g02128 3 37742552 37744400 CCT
Accr4g01497 4 15138869 15140534 Accr4g01497 4 15138869 15140534 ECH
Accr4g01497 4 15138869 15140534 Accr3g02128 3 37742552 37744400 ECH