Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01489 ATGTCCACCACCCAACAACCTACTGACTCCCACACCAACCCTCTCACTCAAATGCTTCAGAGCGTCTTCTCCGACAACAGTAACATCATGCTCGCCGCCATCATCTCCCTCCTCCTCGTCATCCTCTTCGTCCTCCTCCTCCACCTCTACGCCAAATGGTTCCTTGCCCACGCTCACGCTCACGCCCATTCCCAATCCCGCCGCCCTCCCTCCGTCACCGTCTCCGACGTCATTAGACCCGCCCGCTTCCACCACTTCCACACCTTCAACCTCCAAGACTCCCCCATTTCCCACTCCCCCACTAAGGGCCTCGATTCCGCATCCATTTCTGCCATCCCTATTTTCGTATACGAAGCAGAGAACACGCTGAACCAAGAAGCCGATGAACGAGATTTGGAATGCGTGATTTGCTTGAGCATTTTCGAGAACGGAGAAACCGGGCGGAGCTTACCCCAGTGTTGTCACGCTTTTCATGTCGAGTGTATCGATATGTGGCTGAGCTCGCATTCAAATTGCCCAATCTGCAGGGCTCCGATCGGGGAGCTTGATTCTCAGTTTGGCTCTGTTCTTGAGGATGATTCCTCTGCTGTGCTTGAGATTGTGATCGATGATTCTCCGAGTTCTGAGATCATCAGCGAGAACGCTGACGGTGGAACTGAGAGTATTAGTATTAGTACTAATAATGATAATGATCAAGGAGGGTTAAGTGTCTCCGTTATTTCTATATCAGAAACCACTTCATCCTCATTGTTGGATTGTTCTTTGAAGAGGATGTTCAGTACAGTTTTTCCTTCGTCCAATGTCACTGAATTAGGCACATCCTAA 825 0.5018 MSTTQQPTDSHTNPLTQMLQSVFSDNSNIMLAAIISLLLVILFVLLLHLYAKWFLAHAHAHAHSQSRRPPSVTVSDVIRPARFHHFHTFNLQDSPISHSPTKGLDSASISAIPIFVYEAENTLNQEADERDLECVICLSIFENGETGRSLPQCCHAFHVECIDMWLSSHSNCPICRAPIGELDSQFGSVLEDDSSAVLEIVIDDSPSSEIISENADGGTESISISTNNDNDQGGLSVSVISISETTSSSLLDCSLKRMFSTVFPSSNVTELGTS 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01489 274 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 90 180 IPR013083 -
Accr4g01489 274 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 21 180 IPR044675 -
Accr4g01489 274 FunFam RING-H2 finger protein ATL1 92 181 - -
Accr4g01489 274 Pfam Ring finger domain 133 176 IPR001841 -
Accr4g01489 274 ProSiteProfiles Zinc finger RING-type profile. 134 176 IPR001841 -
Accr4g01489 274 CDD RING-H2_EL5-like 133 176 - -
Accr4g01489 274 SUPERFAMILY RING/U-box 124 182 - -
Accr4g01489 274 SMART ring_2 134 175 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01489 Accr-Chr4 15050292 15051116 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01489 23 257 Rapid Response to Elicitors AT3G16720 30.705 9.11e-30 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01489 - - vvo:131624082 248.054