Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01439 ATGGAAGAAGTGGAGCTTGCCTCTCATAATTCGCATTCAGAACAAAACCAACAATCTAAAGAATCAAGCAAACCAGAGAGTGTTTCCTTCTTTGGCTTGTTCTCTGCTGCTGATACAATTGACTATGCCTTGATGTTCTTGGGAAGTGTTGGTGCAAGTGTTCATGGAGCTGCTCTTCCTGTGTTCTTCATTTTGTTCGGTCGTATGATTGATTCTTTGGGACATCTTGCTAAGCATCCTCATAAGTTGTCGTCACGCATTTCTGAGAATGCATTGTACTTGGTCTATCTCGGACTGGTTGTTCTGGTATCAGCTTGGATGGGGGTTGCATTTTGGACGCAAACAGGGGAGAGGCAAACTGCACGTTTGCGTTTTAAGTATCTACAATCTGTTCTAAAAAAGGATATTAATTTCTTCGACAATGAAGCAAGAGACGCTAACATCATTTTCCACATTTCAAGTGACGCTATATTGGTACAAGATGCTATAGGTGACAAGACAGGCCATGCTATACGTTACCTTTCACAATTCATTGTTGGATTTGCCATTGGGTTTACTTCAGTATGGCAGCTTACACTGCTCACATTGGCTGTAGTTCCATTAATAGCTGTAGCTGGAGGAGCTTACACTATAACCATGTCTACCTTGTCAGAAAAAGGCGAAGCAGCATACGCCGAAGCTGGGAAAGTGGCAGAAGAGGTAATTTCTCAAGTTCGTACTGTTTACTCGTTTGTGGGAGAAGATAAAGCAGTTACCTCATACTCAAAATCACTTGATAATGGTCTGAAGCTCGGAAAGAAGAGTGGTTTTGCAAAAGGAATTGGGGTAGGCTTGACATATGGACTCTTGTTTTGTGCTTGGGCATTGCTTCTTTGGTACGCAAGCATACTTGTGAGGCACCATAAAACAAATGGAGGGAAAGCCTTCACAACTATCATCAATGTCATCTTTAGCGGATTTGCTCTTGGTCAAGCTGCGCCTAGCCTCTCAGCGATAGCTAAAGGGCGTGCGGCTGCAGCCAATATCGTGAACATGATTGCATCAGTTTCAAACACGTCAAACAATTTGGAGAATGGGATCGTTTTGCCACAAGTTGTAGGGAAAATTGACTTTTGTGATGTCTGCTTTTCTTACCCCTCAAGATCAAACTTGGTGTTTGAAAATTTGACCTTCACAGTAACTTCCGGGAAGACTATCGCAGTTGTTGGTCCTAGTGGTTCAGGAAAGAGCACTATCATTTCTATGATTCAAAGATTTTATGAACCGACTTCAGGTAAGATACTATTGGATGGACATGACCTGAAGAGTCTTCAGTTGAAATGGTGGAGGAAACAAATGGGCTTGGTTAGCCAAGAACCATTGCTATTTGCCACAACCATATCTGAAAATATTTTACTTGGGAAAACGGATGCAAACATGGATCAAATCATACAAGCAGCGAAAGCTGCAAATGCTCATTCTTTTATTGAAGGATTACCTGATGGCTATCTGACTCCGGTTGGAGAAGGTGGTACACAACTTTCAGGAGGGCAGAAACAGAGAATAGCGATAGCAAGAGCAGTGCTCAGAAACCCAAAAGTATTACTTCTAGATGAGGCAACAAGTGCTCTTGATGCTGAATCAGAATTAATAGTTCAGCAGGCCCTGGAAAATTTAATGTCAAATAGGACTACAATCATCGTCGCCCACCGGTTATCAACTATTCGCGACGTGGATACAATCGTGGTGTTGAGGAATGGCCAGGTTGTAGAAAGTGGTACTCATTCAGAATTGATGTCAAAAAATGGAGACTATGTGCATTTAGTGAGTTTGCAAGCAGCATCATCAGAAAACAACCACACCATGACAGGTTCTTCTAGTGCAATAATATCTCGTTCAGGAAGTTCAAGACATTCAAGTTTCCGGGACGCTTCAGATAACAATCAAATACACCCAGATGACCAATTGATGAAGTCCATTTCAACAAGAGAACCTCATCATCATCAACCTAGTGAAGACCAAAAGTCCGTTCCTTCAATCCTAGACTTGCTAAAACTAAATGCCCCCGAATGGCCTTATGCAGTACTTGGATCAGTGGGTGCAATTATGGCAGGCATGGAAGCTCCTCTTTTTGCTCTTGGTATCACACATATTTTGACTGCATTTTACTCACCTCATGGTTCTAAAATCAAGCAAGAGGTTGATCGTGTAGCTCTTGTATTTGTCGGAGTTGCTGCTATTACTGTACCTATTTATCTGCTGCAACATTACTTCTATACATTGATGGGAGAGCGTCTCACAGCCCGTGTACGCTTATTAATGTTTTCAGCTATCCTGACCAATGAAGTTTCATGGTTCGACTTGGATGAGAACAACACTGGATCATTGACAGCTAAGCTAGCAGCAGATGCAACATTAGTAAGAAGTGCTTTGGCTGACAGACTCTCTACTATTGTACAAAATGTAGCACTCACTGTAACAGCATTTGCTATTGCCTTTACACTGAGTTGGAAACTAACAGCCGTGGTTGCAGCTTGCTTGCCCCTTCTTATTGGAGCTTCTATCACTGAACAACTATTTCTCAAGGGGTTTGGAGGAGATTATAGTGCAGCCTACTCTAGAGCAACTTCTTTGGCACGTGAAGCTATCTCCAATATACGAACTGTTGCTGCTTTTGGTGCAGAAGATCGAATCTCACTCCAATTTGCCACTGAATTGAACAAACCTAACAAGCAAGCACTTCTAAGAGGCCATATCTCAGGCTTTGGTTATGGTGTGACACAATTACTTGCTTTCTGCTCTTATGCACTTGGCCTCTGGTATGCATCCATCTTGATCAAGCACAAGGAATCTCACTTTGGAGATATTATGAAGTCTTTTATGGTTTTAATCATCACAGCTCTGGCAATAGCAGAAACACTAGCTCTTACACCAGACATTGTCAAAGGATCTCAAGTTCTGGGATCAGTTTTTGGTATTCTCCGAAGGAGAACATCAATCCCTCCCAACGAACCTAACTCAAAGGTGATAACCGACATGAAAGGAGAGATAGAGTTCAAAAATGTACACTTTAGCTATCCAATGAGACGTGAAATCACCATTTTTGAGAACCTTAACCTGAAAGTTAAAGCAGGAAAGAGTCTTGCAGTAGTGGGGCCAAGTGGTTCTGGGAAGAGTACAGTGATCTCACTAGTCATGAGATTTTATGACCCAAATTATGGAAAGGTCTCAATCGATGGATGTGATATTAAAAGCCTGAACTTGAGATCCTTAAGACTAAGAATAGGCCTGGTTCAGCAAGAACCTGCATTATTCTCCACCACAATATATGAAAACATCAAGTATGGCAAAGAAGAGGCCTTAGAAATTGAGATAATAAAGGCAGCAAAAGCTGCAAATGCTCATGAATTTATCGCCAGAATGCCTCAAGGGTATCAAACAGAGGTAGGTGAAAGAGGAGTGCAATTATCAGGAGGCCAAAAACAGAGGCTTGCAATTGCTAGAGCTATTTTGAAAGACCCATCCATTCTCTTGTTAGATGAAGCAACAAGTGCATTGGACACGGTTTCAGAGAGATTGGTCCAAGAGGCTTTGGAGAAGCTTCTGAAAGGAAGAACAACAATCTTGGTGGCACACAGATTATTAACAGTTCGAAATGCTCACAATATTGCTGTGCTACAAAATGGTAAAGTGGCCGAAATGGGCAGCCATGAGAGGCTAATTGCTCAACCTCAAAGCATTTATAAGCAGTTGGTTAGTCTACAACAAGATAATAGTACTGACCAAGCAATGAATTGA 3777 0.4181 MEEVELASHNSHSEQNQQSKESSKPESVSFFGLFSAADTIDYALMFLGSVGASVHGAALPVFFILFGRMIDSLGHLAKHPHKLSSRISENALYLVYLGLVVLVSAWMGVAFWTQTGERQTARLRFKYLQSVLKKDINFFDNEARDANIIFHISSDAILVQDAIGDKTGHAIRYLSQFIVGFAIGFTSVWQLTLLTLAVVPLIAVAGGAYTITMSTLSEKGEAAYAEAGKVAEEVISQVRTVYSFVGEDKAVTSYSKSLDNGLKLGKKSGFAKGIGVGLTYGLLFCAWALLLWYASILVRHHKTNGGKAFTTIINVIFSGFALGQAAPSLSAIAKGRAAAANIVNMIASVSNTSNNLENGIVLPQVVGKIDFCDVCFSYPSRSNLVFENLTFTVTSGKTIAVVGPSGSGKSTIISMIQRFYEPTSGKILLDGHDLKSLQLKWWRKQMGLVSQEPLLFATTISENILLGKTDANMDQIIQAAKAANAHSFIEGLPDGYLTPVGEGGTQLSGGQKQRIAIARAVLRNPKVLLLDEATSALDAESELIVQQALENLMSNRTTIIVAHRLSTIRDVDTIVVLRNGQVVESGTHSELMSKNGDYVHLVSLQAASSENNHTMTGSSSAIISRSGSSRHSSFRDASDNNQIHPDDQLMKSISTREPHHHQPSEDQKSVPSILDLLKLNAPEWPYAVLGSVGAIMAGMEAPLFALGITHILTAFYSPHGSKIKQEVDRVALVFVGVAAITVPIYLLQHYFYTLMGERLTARVRLLMFSAILTNEVSWFDLDENNTGSLTAKLAADATLVRSALADRLSTIVQNVALTVTAFAIAFTLSWKLTAVVAACLPLLIGASITEQLFLKGFGGDYSAAYSRATSLAREAISNIRTVAAFGAEDRISLQFATELNKPNKQALLRGHISGFGYGVTQLLAFCSYALGLWYASILIKHKESHFGDIMKSFMVLIITALAIAETLALTPDIVKGSQVLGSVFGILRRRTSIPPNEPNSKVITDMKGEIEFKNVHFSYPMRREITIFENLNLKVKAGKSLAVVGPSGSGKSTVISLVMRFYDPNYGKVSIDGCDIKSLNLRSLRLRIGLVQQEPALFSTTIYENIKYGKEEALEIEIIKAAKAANAHEFIARMPQGYQTEVGERGVQLSGGQKQRLAIARAILKDPSILLLDEATSALDTVSERLVQEALEKLLKGRTTILVAHRLLTVRNAHNIAVLQNGKVAEMGSHERLIAQPQSIYKQLVSLQQDNSTDQAMN 1258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01439 1258 SMART AAA_5 1037 1223 IPR003593 GO:0016887
Accr4g01439 1258 SMART AAA_5 395 581 IPR003593 GO:0016887
Accr4g01439 1258 Pfam ABC transporter 1029 1177 IPR003439 GO:0005524
Accr4g01439 1258 PANTHER ABC TRANSPORTER B FAMILY 11 699 IPR039421 -
Accr4g01439 1258 FunFam ABC transporter B family member 4 1000 1255 - -
Accr4g01439 1258 MobiDBLite consensus disorder prediction 610 645 - -
Accr4g01439 1258 SUPERFAMILY ABC transporter transmembrane region 675 988 IPR036640 GO:0005524|GO:0016020
Accr4g01439 1258 CDD ABC_MTABC3_MDL1_MDL2 1010 1248 - -
Accr4g01439 1258 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1010 1246 IPR003439 GO:0005524
Accr4g01439 1258 FunFam ABC transporter B family member 1 32 360 - -
Accr4g01439 1258 MobiDBLite consensus disorder prediction 1 24 - -
Accr4g01439 1258 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 369 604 IPR003439 GO:0005524
Accr4g01439 1258 Gene3D ABC transporter type 1, transmembrane domain 863 1255 IPR036640 GO:0005524|GO:0016020
Accr4g01439 1258 Pfam ABC transporter transmembrane region 692 961 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr4g01439 1258 Pfam ABC transporter transmembrane region 46 318 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr4g01439 1258 CDD ABC_6TM_Pgp_ABCB1_D1_like 45 330 - -
Accr4g01439 1258 ProSitePatterns ABC transporters family signature. 1149 1163 IPR017871 GO:0005524|GO:0016887
Accr4g01439 1258 CDD ABC_6TM_Pgp_ABCB1_D2_like 677 993 - -
Accr4g01439 1258 Gene3D - 359 606 IPR027417 -
Accr4g01439 1258 Gene3D - 1000 1249 IPR027417 -
Accr4g01439 1258 Gene3D ABC transporter type 1, transmembrane domain 631 857 IPR036640 GO:0005524|GO:0016020
Accr4g01439 1258 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 688 975 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr4g01439 1258 FunFam ABC transporter B family member 1 667 976 - -
Accr4g01439 1258 SUPERFAMILY ABC transporter transmembrane region 33 342 IPR036640 GO:0005524|GO:0016020
Accr4g01439 1258 Pfam ABC transporter 387 535 IPR003439 GO:0005524
Accr4g01439 1258 MobiDBLite consensus disorder prediction 10 24 - -
Accr4g01439 1258 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 46 334 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr4g01439 1258 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 359 605 IPR027417 -
Accr4g01439 1258 FunFam ABC transporter B family member 4 359 612 - -
Accr4g01439 1258 ProSitePatterns ABC transporters family signature. 507 521 IPR017871 GO:0005524|GO:0016887
Accr4g01439 1258 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 999 1248 IPR027417 -
Accr4g01439 1258 CDD ABC_MTABC3_MDL1_MDL2 369 605 - -
Accr4g01439 1258 Gene3D ABC transporter type 1, transmembrane domain 32 612 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01439 Accr-Chr4 14494547 14501747 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01439 20 1249 Calmodulin-binding Proteins AT2G36910 49.400 0.0 1215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01439 K05658 - gmx:100787093 1949.48