Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01430 ATGACTCAAGATGTTGAGATGAAAGATCGCACAACTTCTTCGTATTCTGTTTCTTCAGCTGATTCATCTGCCTTGCAGCATTTAACGGAGATATCATTCCTTATTAAGACCGGTTCGTACTCTAAGGAGGTTCATAGAATTGCTCGTGCCGTTCGCCTTACAACTTTGTTGAGGGGCAAATTGACAGCATTGGTGGTCGCATCTTTTATCGATCACGTTGCTTGTTCGGGTTCTGAGCCTAACGCCAGATTCTTTGCCTATCTTCCCGAGGAAGAATGTTATGAGATGGAAGTAGATACTGCAACATCTACTGTTCAAGCTTCAGCCAAGCACTTATCGCCTGAGATGGAGATGTATTGTTACTTGCTCATTCTACTTTTTCTGATTGATCAGAAGAGATATAAGGAGGCCAAAGATTGTTCCTCAGAAAGTATTGCCCGAGTGAAGAAACTTAACAGAAGAACTGTCGATGTTATTGCAGCCAGATTGTACTTCTATTATTCATATATTCATGAACTCACGGGAGATCTTGCAGAAATTCGGGGTAACCTTCTTGAGTTGCACCAGATTGCTACCCTTCACCATGATGAGCTTGGTCAGGAAACACTTCTTAATTTGTTGCTTCGCAACTACCTCCACTACAACCTATTTGATCAGGCGGAGAAGTTGAGATCTAAGGCGCAACGATTTGAGGCACATTCAAACCAGCAGTTCTGTCGATATCTCTTCTACCTCGGGAAAATTCAAACAATTCAGTTGGAGTACACTGATGCAAAAGAGTCTCTCCTGCAAGCTGCTCGCAAGGCTCCAGTTGCTGCACTTGGTTTTCGAATTCAGTGTAATAAGTGGGCTGTAATAGTGCGTTTGCTGTTGGGAGAAATACCTGAGAGGACCATCTTCACACAGAAAGGAATGGAGAAAGCTTTAAAGCCTTACTTTGAGCTTACAAATGCTGTTCGAATTGGAGACCTGGAGCAATTTAGGAATGTTGCTGATAAATTTGGCACTACTTTTCGGGCTGATGGAATTCATAATTTGATTGTTAGGTTGCGTCATAACGTCATCAGGACTGGTTTACGAAACATTAGCATTTCTTATTCTCGTATCTCGCTTGCTGATGTGGCACAAAGATTAAGGTTAAACTCTGCAAACCTCGTTGCTGATGCTGAGAGCATTGTGGCCAAGGCCATCAGAGATGGTGCAATTGATGCTACATTGGACCATGGTAATGGGTGGATGGTATCTAAGGAAACTGTAGATGTATACTCCACTACCGAACCTCAACTGTCTTTTAATTCTCGAATTGCCTTCTGTCTTGAACTGCACAATAAGGCCATCCGAGCACTGCGTTTCCCACCAAACGCTCATGATGACAAGGGAAGCGCTGAGAAGCGGAGAGAGAGGCAGCAGCAGCAGGAGCAAGAACTAGCTAAGCACATTCAGGAGGAGGAGGAGGATGATTTCTGA 1467 0.4363 MTQDVEMKDRTTSSYSVSSADSSALQHLTEISFLIKTGSYSKEVHRIARAVRLTTLLRGKLTALVVASFIDHVACSGSEPNARFFAYLPEEECYEMEVDTATSTVQASAKHLSPEMEMYCYLLILLFLIDQKRYKEAKDCSSESIARVKKLNRRTVDVIAARLYFYYSYIHELTGDLAEIRGNLLELHQIATLHHDELGQETLLNLLLRNYLHYNLFDQAEKLRSKAQRFEAHSNQQFCRYLFYLGKIQTIQLEYTDAKESLLQAARKAPVAALGFRIQCNKWAVIVRLLLGEIPERTIFTQKGMEKALKPYFELTNAVRIGDLEQFRNVADKFGTTFRADGIHNLIVRLRHNVIRTGLRNISISYSRISLADVAQRLRLNSANLVADAESIVAKAIRDGAIDATLDHGNGWMVSKETVDVYSTTEPQLSFNSRIAFCLELHNKAIRALRFPPNAHDDKGSAEKRRERQQQQEQELAKHIQEEEEDDF 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01430 488 FunFam 26S proteasome non-ATPase regulatory subunit 3 120 443 - -
Accr4g01430 488 Gene3D - 82 445 - -
Accr4g01430 488 ProSiteProfiles PCI domain profile. 239 420 IPR000717 -
Accr4g01430 488 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 3/COP9 SIGNALOSOME COMPLEX SUBUNIT 3 15 479 - -
Accr4g01430 488 MobiDBLite consensus disorder prediction 451 481 - -
Accr4g01430 488 MobiDBLite consensus disorder prediction 450 488 - -
Accr4g01430 488 Pfam Proteasome regulatory subunit C-terminal 420 487 IPR013586 GO:0000502|GO:0030234|GO:0042176
Accr4g01430 488 Coils Coil 462 486 - -
Accr4g01430 488 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 345 438 IPR000717 -
Accr4g01430 488 Pfam PCI domain 311 416 IPR000717 -
Accr4g01430 488 SMART PCI/PINT associated module 174 345 - -
Accr4g01430 488 SUPERFAMILY "Winged helix" DNA-binding domain 344 422 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01430 Accr-Chr4 14403129 14410582 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01430 K03033 - gmx:100814379 734.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g00065 3 843467 846738 Accr4g01430 4 14403129 14410582 CCT
Accr4g01430 4 14403129 14410582 Accr4g01430 4 14403129 14410582 ECH