Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01419 ATGGGAGATCAATCGGAAAACGTGGTCTACCTACACGGGGACCTTGATTTAAAAATTCTTGAGGCTCGATATTTGCCGAACATGGATTTGTTATCGGAGCGTTTTAGTCAATTCTTTTCCCTCTTCAACTCCTGCACAACTTCAGTTTCCGGTAGACCGAGACGCCATCGTCACAGAAAAATCATTACCAGCGATCCTTACGTAAAAGTTTGCCTCGCCAAAGCTACGGTGGCTCGCACTCGGGTCATCTCCAACTCGCAGGATCCGGCGTGGAATGAACATTTCAAAATCCCTCTCGCTCATCCCGTATCGCAGGTTGAGTTCTACGTCAAAGACGATGACATATTTGGCGCTGATCTCATCGGAGTCGCAACCGTCTCCGCCGAGCGAATCTTATCAGGTGAACTCATCAGCGATTGGTTCCCCGTTCTTGGTTCTTTTGGTAAACCACCCAAACCTGATTGTGCCATTCGTCTCGAGATGAAATTCACGAAATGTGAGGATAGTCCGCTGTACACTTACGGAATTTCTTCCAATCCGGACCGTTTCAGAGTGCGGGATTCTTATTTTCCGGTGCGTCATGGAGGATCGGTGACGTTATATCAGGATGCACACGTTCCAGAATCGATGGTGCCGAAAATTGAATTGGAGAATGGCGTTTTCTTCCAGCAAGGCAGATGTTGGGAAGATATATGTCATGCAATTTTAGAAGCGCACCATTTGGTTTACATTGTAGGCTGGTCGATCTACCATAAGGTGAAGCTGGTGAGGGAGCCGACGAAGCCCTTGCCTAATGGTGGCGATTTAAATTTGGGTGATTTGCTAAAGTACAAGTCAGGAGAAGGTGCGCGAGTTTTATTGTTGGTTTGGGATGATAAGACTTCACACAACAAATTTTTCATTAAAACGGATGGAGTAATGCGTACTCACGATGAAGAAACCCGAAAATTTTTCAAACACTCCTCGGTTTTCTGTGTGCTGTCACCTCGATATGCCAGCAGTAAGCTTAGCTTTATCAAACAGCAGGTTGTCGGAACCCTCTTTACACATCATCAGAAATGTGTGATTGTGGATACTCAAGCACAAGGCAACAACCGCAAGATAACTGCATTTATAGGCGGTCTAGATCTGTGTGATGGCCGGTATGATACACCTGAGCATCGACTTTTCCAAGATATGGACACTGTTTATAAGGATGATTATCACAACCCTACATTTCCTGTCGGAATGAAGGGTCCAAGGCAACCATGGCATGATTTACATTGCAAAATTGAGGGGCCTGCCGCATATGATATACTTACTAATTTTGAGCAACGCTGGAGAAAAGCAACCAAGTGGCGCGAGCTGGGTCAAAAATTTAAAAAAGTATCTCGTTGGCACGATGATTCTTTGTTAAAGCTAGAACGCATCTCTTGGATTCTTAGTCCTTCGGCATCTATTTCAAATGATGATCCAGAACTATGGGTTTCAAAGGAAGAAGAACCCGAAAGCTGGCATGTTCAGATTTTTCGATCAATAGATTCAGGATCATTGACAGGATTTCCTAAGGATGTGTATGAAGCTAACAATCAGAACCTTGTTTGTGCAAAAAATTTGGTCATTGACGTAAGTATACAGACAGCATACATACAAGCTATCAGATCTGCTCAACATTTTATTTACATTGAGAATCAGTATTTTGTTGGATCGTCTTTCGCATGGCCTTCTTGCAAAGAAGCAGGTGCTGACAATTTAATTCCTATGGAGTTGGCATTGAAGATTGTCAGCAAAATTAGAGCCAATGAGAGATTTGCTGTTTATGTTGTTATACCAATGTGGCCTGAGGGCGTCCCTTCTTCTGCAGCAGTTCAAGAGATTCTTTTTTGGCAGAGACAAACTATGCAAATGATGTATGAAATCATAGCACAAGAGTTGAAATCCATGCGCATTCACGACAGAAGCCCAAGAGATTACCTCAATTTCTACTGTCTGGGGAATCGGGTTAACTGGCCGGCTGAAGTTTTAAGTTCAAGTAATTCAACTCTAAATGACACTGATACGGTTTCAGCTTCACAAAATTTCCAACGCTTTATGATTTACGTGCACGCCAAGGGTATGATTGTGGATGATGAGTATGTGTTGCTCGGCTCTGCCAATATCAATCAACGATCGTTGGCCGGTTCAAGAGATACAGAGATAGCAATGGGAGCATATCAACCCCATCATACATGGGAAAAGACAGGGGCACACCCTCACGGCCAGGTATACGGGTATAGAATGTCTTTGTGGGCAGAACATCTAGGTATGGTTGATGATTGCTTCAAGGAGCCTAAAAGTTTTGAATGCGTGAAGAACGTGAACAAGATTGCGAGTGAAAACTGGAAGAAGTACACAGCTGATGAGTTCAGTCCATTACAGGGGCACCTTCTGAAATATCCAATACATGTAGATGTGAATGGCAAGGTATGTCCCATACCTGGATATGAAAATTTTCCTGATGTGGGTGGCAAGATACTTGGCAGCTGGACTCCCCTTCCTGATGTCCTAACTACGTAG 2535 0.4375 MGDQSENVVYLHGDLDLKILEARYLPNMDLLSERFSQFFSLFNSCTTSVSGRPRRHRHRKIITSDPYVKVCLAKATVARTRVISNSQDPAWNEHFKIPLAHPVSQVEFYVKDDDIFGADLIGVATVSAERILSGELISDWFPVLGSFGKPPKPDCAIRLEMKFTKCEDSPLYTYGISSNPDRFRVRDSYFPVRHGGSVTLYQDAHVPESMVPKIELENGVFFQQGRCWEDICHAILEAHHLVYIVGWSIYHKVKLVREPTKPLPNGGDLNLGDLLKYKSGEGARVLLLVWDDKTSHNKFFIKTDGVMRTHDEETRKFFKHSSVFCVLSPRYASSKLSFIKQQVVGTLFTHHQKCVIVDTQAQGNNRKITAFIGGLDLCDGRYDTPEHRLFQDMDTVYKDDYHNPTFPVGMKGPRQPWHDLHCKIEGPAAYDILTNFEQRWRKATKWRELGQKFKKVSRWHDDSLLKLERISWILSPSASISNDDPELWVSKEEEPESWHVQIFRSIDSGSLTGFPKDVYEANNQNLVCAKNLVIDVSIQTAYIQAIRSAQHFIYIENQYFVGSSFAWPSCKEAGADNLIPMELALKIVSKIRANERFAVYVVIPMWPEGVPSSAAVQEILFWQRQTMQMMYEIIAQELKSMRIHDRSPRDYLNFYCLGNRVNWPAEVLSSSNSTLNDTDTVSASQNFQRFMIYVHAKGMIVDDEYVLLGSANINQRSLAGSRDTEIAMGAYQPHHTWEKTGAHPHGQVYGYRMSLWAEHLGMVDDCFKEPKSFECVKNVNKIASENWKKYTADEFSPLQGHLLKYPIHVDVNGKVCPIPGYENFPDVGGKILGSWTPLPDVLTT 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01419 844 SUPERFAMILY Phospholipase D/nuclease 536 775 - -
Accr4g01419 844 PIRSF PLD_plant 1 844 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Accr4g01419 844 SUPERFAMILY Phospholipase D/nuclease 185 450 - -
Accr4g01419 844 CDD C2_plant_PLD 8 164 - -
Accr4g01419 844 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 346 381 IPR001736 GO:0003824
Accr4g01419 844 FunFam Phospholipase D delta 218 462 - -
Accr4g01419 844 Pfam C2 domain 13 143 IPR000008 -
Accr4g01419 844 Gene3D Endonuclease Chain A 507 738 - -
Accr4g01419 844 Gene3D C2 domain 12 171 IPR035892 -
Accr4g01419 844 Gene3D Endonuclease Chain A 219 466 - -
Accr4g01419 844 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 690 717 IPR001736 GO:0003824
Accr4g01419 844 PANTHER PHOSPHOLIPASE D 5 833 IPR015679 -
Accr4g01419 844 SMART pld_4 346 381 IPR001736 GO:0003824
Accr4g01419 844 SMART pld_4 690 717 IPR001736 GO:0003824
Accr4g01419 844 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 11 165 IPR035892 -
Accr4g01419 844 Pfam Phospholipase D C terminal 764 834 IPR024632 -
Accr4g01419 844 Pfam Phospholipase D Active site motif 347 381 IPR001736 GO:0003824
Accr4g01419 844 Pfam Phospholipase D Active site motif 691 717 IPR001736 GO:0003824
Accr4g01419 844 ProSiteProfiles C2 domain profile. 1 141 IPR000008 -
Accr4g01419 844 SMART C2_3c 14 140 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01419 Accr-Chr4 14301644 14306735 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01419 1 843 Phospholipase D Gene Family (Wang group) AT2G42010 52.759 0.0 932
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01419 K01115 - qsa:O6P43_018731 1423.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr4g01419 4 14301644 14306735 Accr4g01419 4 14301644 14306735 ECH