Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Accr4g01387 | ATGGCATACCACCAGATCCAGGGTCATACGCCCCCGCCTGGATCCAATTCGAGTTCTGGATTTCAACCAATAAACTCCCCCTTTGGTGATACCACTTTTACCAAGGTATTTGTTGGAGGATTGGCGTGGGAGACCCAGAGCGAAACCATGCGCCGATACTTTGAGCAGTTTGGCGACATTCTTGAAGCTGTTGTAATCACTGATAGGAATACAGGCCGATCTAAAGGCTATGGTTTTGTGACTTTCCGGGATCCTGAGGCTGCTAGAAGAGCCTGTGCTGATCCAACTCCTGTCATTGATGGAAGGAGGGCCAATTGTAACTTGGCTTCACTTGGACGACCGTGGCCTCCTCTTCCATATGGACGGGTAAGGCCAGCTCCTGCTTACATTGGAAATGTGCAACCAGCCAGAGGTGCCTATGTTGGAGGTTTTGGCTATCAGCAACCACCTTCTTACAGCTATCAGCAAGGATTGGTTTATCCTCATTATGGGTATACGGCATATGGGCCTGAATATGTATATCCACAGGGTTTGTACAACCCATATATGGGCCAGCAGTATGTTCAGATATATGGAGTGCCTGGGGCAGTGAATAATACTCTTTATCCTTATGGGCAATTAGGTCAGGCTATTCCCAGTAGTCATGGTTATGCAGGAATGCAGGGCTATGCTGTATCTGGCCACCACATTGTACCTTATGGTGGAACCAATGTTAATGCCCTGACTACTTCACCTATGCCTACCATTCAAGTACCATATCCCAGTGGAATTGCTGCACCAATTCCAGGACAACCCCAATTTATTGTCCCTGCTCCTTCTCAGTTTATGCAAGGAACTGGTCCTGACCAAGCAGCTGGGTGA | 861 | 0.4808 | MAYHQIQGHTPPPGSNSSSGFQPINSPFGDTTFTKVFVGGLAWETQSETMRRYFEQFGDILEAVVITDRNTGRSKGYGFVTFRDPEAARRACADPTPVIDGRRANCNLASLGRPWPPLPYGRVRPAPAYIGNVQPARGAYVGGFGYQQPPSYSYQQGLVYPHYGYTAYGPEYVYPQGLYNPYMGQQYVQIYGVPGAVNNTLYPYGQLGQAIPSSHGYAGMQGYAVSGHHIVPYGGTNVNALTTSPMPTIQVPYPSGIAAPIPGQPQFIVPAPSQFMQGTGPDQAAG | 286 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Accr4g01387 | 286 | PANTHER | BOULE-RELATED | 14 | 249 | - | - | |
Accr4g01387 | 286 | SMART | rrm1_1 | 35 | 107 | IPR000504 | GO:0003723 | |
Accr4g01387 | 286 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 36 | 92 | IPR000504 | GO:0003723 | |
Accr4g01387 | 286 | Gene3D | - | 2 | 116 | IPR012677 | - | |
Accr4g01387 | 286 | MobiDBLite | consensus disorder prediction | 9 | 25 | - | - | |
Accr4g01387 | 286 | SUPERFAMILY | RNA-binding domain, RBD | 9 | 121 | IPR035979 | GO:0003676 | |
Accr4g01387 | 286 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 34 | 111 | IPR000504 | GO:0003723 | |
Accr4g01387 | 286 | FunFam | RNA-binding (RRM/RBD/RNP motifs) family protein | 28 | 114 | - | - | |
Accr4g01387 | 286 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
Accr4g01387 | 286 | CDD | RRM_RBM24_RBM38_like | 34 | 109 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Accr4g01387 | Accr-Chr4 | 13931996 | 13935043 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Accr4g01387 | 10 | 166 | C2H2 Transcription Factor Family | AT2G19380 | 29.762 | 6.94e-16 | 75.9 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Accr4g01387 | - | - | pcin:129318420 | 503.827 |