Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01377 ATGGTGAAGGAGACCGAATACTATGACGTGCTGGGAGTCAGTTCCACGGCAACTGAGGCCGAGATTAAAAAAGCTTATTACATAAAGGCACGACAAGTACATCCAGATAAAAACCCAAATGACCCCAACGCAGCACAAAAATTTCAGGTTTTGGGTGAGGCTTACCAAGTTTTGAGTGATCCCGATCAAAGACAAGCTTATGATACTCATGGAAAAGCTGGAATCTCAACTGATGCCATTATTGATCCAGCAGCAATCTTCGCCATGCTTTTTGGCAGTGAGCTTTTTGAGGAGTACATAGGTCAATTAGCCATGGCATCAATGGCATCAATGGATATCTTTAGTGAAGGGGAACAATTTGATGCTAAAAAGTTGCAAGAGAAAATGAGGGTTGTTCAGAAAGATAGAGAAGAAAAGCTTGCAGAGATACTAAAAAATAGACTGAACCAATATGTCCAAGGAAACAAATCGGAATTTACCAGTCATGCAAAAAATGAAGTGTCACGACTATCCAATGCAGCTTATGGGGTTGATATGTTGAATACCATTGGCTACATATATGCAAGGCAGGCAGCTAAAGAGCTAGGGAAGAAAGCAATTTATTTAGGTGTGCCTTTCATTGCTGAGTGGTTTAGAAACAAAGGACACTTCATCAAGTCCCAAGTTACAGCAGCTACAGGGGCAATTGCTCTGATCCAGCTGCAGGAGGATATGAAGAAGCACCTAAGTGCAGAAGGGAACTTCACTGAACCAGAGCTAGAAGAATACATGCAATCTCATAAGAAATTAATGATTGACTCATTGTGGAAGCTTAATGTCGCTGACATTGAGGCTACTTTATCCCGTGTCTGTCAAATGGTTCTCCAAGACAACAGTGTCAAAAAAGAAGAACTCCGTGCACGAGCTAAGGGGTTGAAAACTCTTGGTAAAATCTTTCAGGGAGTTAAGTCAACCGATGGAAATGAGGGTGAAAATGCACCAGGAGTGCATAAATTGAATGGTGGGGAACCAAGCAATGACGCTTGTTCTCCTGGTACATCTCAAAAAAGTTCAAATCCTGATTTTTCATCACAAACTGTCCCTGTGCCTCAGAGTCCCTATGTGGAGGCCCCCCAATTTTCCGGCTCTTTCATGGATTATAACTTCCCTAGGCCAACAGCACCCCCTGGTGCCCAGAGACCAATCAACAGGGATTGA 1197 0.4277 MVKETEYYDVLGVSSTATEAEIKKAYYIKARQVHPDKNPNDPNAAQKFQVLGEAYQVLSDPDQRQAYDTHGKAGISTDAIIDPAAIFAMLFGSELFEEYIGQLAMASMASMDIFSEGEQFDAKKLQEKMRVVQKDREEKLAEILKNRLNQYVQGNKSEFTSHAKNEVSRLSNAAYGVDMLNTIGYIYARQAAKELGKKAIYLGVPFIAEWFRNKGHFIKSQVTAATGAIALIQLQEDMKKHLSAEGNFTEPELEEYMQSHKKLMIDSLWKLNVADIEATLSRVCQMVLQDNSVKKEELRARAKGLKTLGKIFQGVKSTDGNEGENAPGVHKLNGGEPSNDACSPGTSQKSSNPDFSSQTVPVPQSPYVEAPQFSGSFMDYNFPRPTAPPGAQRPINRD 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01377 398 MobiDBLite consensus disorder prediction 315 398 - -
Accr4g01377 398 FunFam Chaperone protein dnaJ 10 1 83 - -
Accr4g01377 398 CDD DnaJ 6 60 IPR001623 -
Accr4g01377 398 Gene3D DnaJ domain 1 83 IPR036869 -
Accr4g01377 398 Pfam DnaJ domain 6 68 IPR001623 -
Accr4g01377 398 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 2 331 - -
Accr4g01377 398 Pfam X-domain of DnaJ-containing 133 325 IPR026894 -
Accr4g01377 398 SMART dnaj_3 5 63 IPR001623 -
Accr4g01377 398 PRINTS DnaJ domain signature 26 41 IPR001623 -
Accr4g01377 398 PRINTS DnaJ domain signature 63 82 IPR001623 -
Accr4g01377 398 PRINTS DnaJ domain signature 43 63 IPR001623 -
Accr4g01377 398 PRINTS DnaJ domain signature 8 26 IPR001623 -
Accr4g01377 398 MobiDBLite consensus disorder prediction 339 371 - -
Accr4g01377 398 ProSiteProfiles dnaJ domain profile. 6 71 IPR001623 -
Accr4g01377 398 Coils Coil 122 142 - -
Accr4g01377 398 SUPERFAMILY Chaperone J-domain 2 101 IPR036869 -
Accr4g01377 398 ProSitePatterns Nt-dnaJ domain signature. 48 67 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01377 Accr-Chr4 13540570 13546445 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01377 7 70 C2H2 Transcription Factor Family AT1G74250 42.029 8.71e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01377 - - gmx:100780905 657.907