Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01360 ATGGCTGGGGATAGGGTTACAGAGGAGGCGGTGAGGGATGAAAGAGAGGAGAAAAGGAAGCGAATGCTCTCGTCTACGAGATCGTCTTCTTCTTCGTCGTCGTCTTCTTCCGATGACCGGGAATACGAAGTTCAGGACCTGAGAGACAGGTTGAAATCGTCGAGAGGAAGCCGACTCCAGTTGATCGAGGAGGAGTTGAAGCAACTCCACCAGAGGAAACTCAGTCGCTACGTCCTTGACGGCATCCGAGGCTTCTCCAAAGATTTCATCATTCATCCAGAGAAGAACAGGTGGTATCGAGTATGGACAAAATTCATATTGTTGTGGGCAATATACTCATCCTTCTTCACCCCAATGGAGTTTGGATTTTTTCGTGGGCTAGATAAGGACCTCTTTATATTGGATATAATTGGCCAAGTTGCATTTCTTGTAGACATTGTTGTGCAGTTCTTCCTTGCCTATAGGGACAGTCAGACCTATCGTATGATTTACAAGCCATCCTCTATAGCTCTGCGATATCTAAAATCTAGCTTTATCTTTGATCTTCTTGGATGTATGCCTTGGGACATGATCTATAAGGCTAGTAGAAGAAGAGAGGGTGTAAGGTATCTTCTTTGGATAAGATTATATCGGGTGCGAAAAGTGACTGAATTTTTTCAGAGGATGGAGAAGGACATCCGTATCAATTACATGTTTACTAGGATTGTGAAACTTCTAGTGGTTGAACTCTACTGCACGCATACAGCTGCTTGCATCTTCTACTACTTGGCTACCACACTACCTGCATCTCAAGAGGGTTACACATGGATAGGGAGTTTGAAGCTGGGCGACTACAGTTATATGAATTTCAGAGAGATTGATCTTTGGAAGCGTTATACAACATCTTTGTATTTCGCTATTGTTACAATGGCCACGGTTGGCTATGGAGACATACATGCAGTAAATATGAGGGAGATGATATTCGTAATGGTATATACTTCATTTGATATGGTTCTTGGCGCTTATTTAATTGGTAACATGACCGCTTTAATAGTCAAAGGATCAAAAACAGAAAAGTTTAGGGATAGAATGACAGATCTTTTGAAATATATGAATAGAAACAGACTCGGAAGGGACATTCGTGAGCAATTAAAAAGCCATATGCTCTTACAGTATGAAAGTAGCTACACTGAGCCAGCTGCCATTCAAGACCTCCCCATCTCAGTTCGCTCCAAGATATCCCAAGAGTTATATTTGCCATACATCGAGAAGGTGCCTCTCTTTAAGGGTTGCTCTTTAGAATTTATCAATCAGATTGTGATGAGGCTCCATGAGGAATTCTTTCTTCCGGGAGAAGTAATATTGGAACAAGGAAATGTTGTAGATCAACTATACTTTGTCTGTCATGGTGTGCTGGAGGAAGTAGGCCCCTGTGAAAATGGACCTGAAGAGACTGTTTCACTTTTAGAGCCAAATAGTTCATTTGGGCATATATCTATTTTATGTAACATTCCTCAACCATATACTGTTCGGGTGTGTGAATTGTGTAGGCTTCTGCGGCTTGATAAACAATCATTTACAGATATCCTTGATATATACTTCTATGATGGGAGGAAAGTACTAAACAACCTTCTAGAGGGAAAAGACTCTAGTCGAGGTAAGCAATTGGAGTCAGATATCACATTCCATATTGGAAAGCAAGAAGCTGAACTTGCTTTAAAGGTCAATAATGCAGCTTTCAATGGGGAGCTGAATCATCTCAAAGGATTGACTCGAGCTGGAGCTGATCTAAACAAGACAGATTATGATGGACGTTCCCCGTTGCATCTTGCAGCATCTAGAGGATATGAAGAAATCACCCTTTTCCTTATCCAGGAAGGTGTTGAAATCGATAAGAGAGATAACTTTGGGAACACTCCCTTACTTGAAGCTGTAAAGAATGGACATGATCGAGTTGCTTCTTTACTTGTTGGACAAGGGGCTTCTTTGGACATAGAGGATGCCGGTAGTATTCTATGTAATGCTATTGCAAGGGGAGATTCAGATTATCTTAAAAGACTATTAGCTAATGGCATGGATCCTAACACAAAAGACTATGATTACCGAAGCCCTCTTCATGTGGCTGCGGCTGAGGGTTTATTTTTAATGGCAAAGTTGTTGGTAGAAGCTGGAGCTAGCGTTTTAATCCAAGACAGATGGGGCAATACCCCACTTGATGAAGCCAGGAAGTGTGGAAATAACAATCTAATCAAGCTATTGGAAGATGCAAAGTCTGCTCAGTTGTCAAAATTCCCTCATCTCTCCTCAGAACTTGCAGATAAATTTCATCCTAAGAAATGTACAGTTTTTCCTTTCCACCCATGGGATCCAAAAGAACATAGAAGACATGGGATTGTACTATGGGTTCCACACACCATTGAAGATCTTATCAAAACAGCAGCAGAGCAGCTAGGTGTTTCTAGAGATTGCTGTATTATTCTATCAGAGGATGCTGGTAAAATCACTGATGTCAACTTGATTATGGATGGTCAAAAGTTGTATCTAGTCCATGAAACACATTAA 2541 0.4116 MAGDRVTEEAVRDEREEKRKRMLSSTRSSSSSSSSSSDDREYEVQDLRDRLKSSRGSRLQLIEEELKQLHQRKLSRYVLDGIRGFSKDFIIHPEKNRWYRVWTKFILLWAIYSSFFTPMEFGFFRGLDKDLFILDIIGQVAFLVDIVVQFFLAYRDSQTYRMIYKPSSIALRYLKSSFIFDLLGCMPWDMIYKASRRREGVRYLLWIRLYRVRKVTEFFQRMEKDIRINYMFTRIVKLLVVELYCTHTAACIFYYLATTLPASQEGYTWIGSLKLGDYSYMNFREIDLWKRYTTSLYFAIVTMATVGYGDIHAVNMREMIFVMVYTSFDMVLGAYLIGNMTALIVKGSKTEKFRDRMTDLLKYMNRNRLGRDIREQLKSHMLLQYESSYTEPAAIQDLPISVRSKISQELYLPYIEKVPLFKGCSLEFINQIVMRLHEEFFLPGEVILEQGNVVDQLYFVCHGVLEEVGPCENGPEETVSLLEPNSSFGHISILCNIPQPYTVRVCELCRLLRLDKQSFTDILDIYFYDGRKVLNNLLEGKDSSRGKQLESDITFHIGKQEAELALKVNNAAFNGELNHLKGLTRAGADLNKTDYDGRSPLHLAASRGYEEITLFLIQEGVEIDKRDNFGNTPLLEAVKNGHDRVASLLVGQGASLDIEDAGSILCNAIARGDSDYLKRLLANGMDPNTKDYDYRSPLHVAAAEGLFLMAKLLVEAGASVLIQDRWGNTPLDEARKCGNNNLIKLLEDAKSAQLSKFPHLSSELADKFHPKKCTVFPFHPWDPKEHRRHGIVLWVPHTIEDLIKTAAEQLGVSRDCCIILSEDAGKITDVNLIMDGQKLYLVHETH 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01360 846 CDD CAP_ED 420 534 IPR000595 -
Accr4g01360 846 PRINTS EAG/ELK/ERG potassium channel family signature 244 254 IPR003938 GO:0005249|GO:0006813|GO:0016020
Accr4g01360 846 PRINTS EAG/ELK/ERG potassium channel family signature 135 145 IPR003938 GO:0005249|GO:0006813|GO:0016020
Accr4g01360 846 PRINTS EAG/ELK/ERG potassium channel family signature 292 309 IPR003938 GO:0005249|GO:0006813|GO:0016020
Accr4g01360 846 PRINTS EAG/ELK/ERG potassium channel family signature 336 345 IPR003938 GO:0005249|GO:0006813|GO:0016020
Accr4g01360 846 PANTHER POTASSIUM CHANNEL AKT1 67 843 IPR045319 GO:0005249|GO:0006813
Accr4g01360 846 SUPERFAMILY Ankyrin repeat 569 748 IPR036770 -
Accr4g01360 846 Gene3D - 662 756 IPR036770 -
Accr4g01360 846 ProSiteProfiles Ankyrin repeat region circular profile. 693 725 - -
Accr4g01360 846 Pfam Ion transport protein 100 345 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Accr4g01360 846 Pfam Ankyrin repeats (3 copies) 571 660 IPR002110 GO:0005515
Accr4g01360 846 Pfam Ankyrin repeats (3 copies) 666 747 IPR002110 GO:0005515
Accr4g01360 846 MobiDBLite consensus disorder prediction 1 24 - -
Accr4g01360 846 ProSiteProfiles Ankyrin repeat region circular profile. 596 628 - -
Accr4g01360 846 MobiDBLite consensus disorder prediction 1 43 - -
Accr4g01360 846 Gene3D - 101 346 - -
Accr4g01360 846 PRINTS Ankyrin repeat signature 709 723 IPR002110 GO:0005515
Accr4g01360 846 PRINTS Ankyrin repeat signature 597 612 IPR002110 GO:0005515
Accr4g01360 846 FunFam Gated outwardly-rectifying K+ channel 635 761 - -
Accr4g01360 846 FunFam Potassium channel SKOR 100 345 - -
Accr4g01360 846 ProSiteProfiles cAMP/cGMP binding motif profile. 420 540 IPR000595 -
Accr4g01360 846 Gene3D Jelly Rolls 390 553 IPR014710 -
Accr4g01360 846 ProSiteProfiles Ankyrin repeat profile. 629 661 IPR002110 GO:0005515
Accr4g01360 846 FunFam Potassium channel KAT2 408 545 - -
Accr4g01360 846 SUPERFAMILY cAMP-binding domain-like 348 537 IPR018490 -
Accr4g01360 846 ProSiteProfiles Ankyrin repeat profile. 596 628 IPR002110 GO:0005515
Accr4g01360 846 ProSiteProfiles KHA domain profile. 772 846 IPR021789 -
Accr4g01360 846 ProSiteProfiles Ankyrin repeat profile. 693 725 IPR002110 GO:0005515
Accr4g01360 846 SMART cnmp_10 420 538 IPR000595 -
Accr4g01360 846 Gene3D - 554 661 IPR036770 -
Accr4g01360 846 Pfam Cyclic nucleotide-binding domain 440 524 IPR000595 -
Accr4g01360 846 ProSiteProfiles Ankyrin repeat region circular profile. 629 660 - -
Accr4g01360 846 Pfam KHA, dimerisation domain of potassium ion channel 771 841 IPR021789 -
Accr4g01360 846 SUPERFAMILY Voltage-gated potassium channels 95 345 - -
Accr4g01360 846 SMART ANK_2a 629 658 IPR002110 GO:0005515
Accr4g01360 846 SMART ANK_2a 596 625 IPR002110 GO:0005515
Accr4g01360 846 SMART ANK_2a 693 722 IPR002110 GO:0005515
Accr4g01360 846 SMART ANK_2a 726 756 IPR002110 GO:0005515
Accr4g01360 846 SMART ANK_2a 660 689 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01360 Accr-Chr4 13384646 13392571 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01360 667 746 Ion Channels AT5G37500 35.294 3.05e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01360 K21867 - gmx:100814385 1363.21