Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01359 ATGTCATTCTCTCTCCTTGAAGCGTGTAAGAAGAGAAAGAGATTGCCCAAGGTTTTCACGTTTCACTCTTTCGCCGACCCTGGTTGCCCAATCAGTTCTAACGGACCTTTTAGAGATAATATCCGTCTCTTTCTTCAAGAATGTGGTGAGCTTGAAGATTTTCAGATCCAGGGCATGCCTCTATGGACCACCGGTCTTATTCACGAGAAATCAAACTGTATGATCCCTCTTTACACCATCGAAGAGAATGTTTGCCACTCTTCGCACCCCTTCTGCGATCATTGCCGATGTGCAGGATGGAGCGGCCATTTTGTATCGAAGAGAAGATACCATTTCATAATCGCCGCCGATAATAAATCGTTGACTGAAGGTTTTCTTGATGATCAGAGTCATCTCTTGCATGGAATGATTCACAGTAATGGGTACGGCCATTTGCTCTGTATTAATGGCATTGAAGGGGGTTCTAAATTTCTCAGTGGCAGAGAAATCATGGATCTATGGGATAGGATCTGCACAATTCTTCGAACAAGGAAAATCGCAGTTGAAGATACATCAAGGAAGCGTTCAATGGATCTTCGCCTACTTCATGGAGTTGCTTATGGCCATTCTTGGTTTGGTAGGTGGGGTTACAGATTTTGTCGTGGAAGCTTCGGTGTCACAGAGCACAATTATAATGCAGCAATCGAACTTCTAAGTTCATTAGAGCTTGATGAGGTCGTTCAATGTTTTGGTAATACAACGTGCCATAAGGAAATCAAACAAATAATTCGCCATTATAGAGACATGAGTGAAACCCAGTTGATTACAATCAAGGATCTTCTCAGGTTTATGCTTACTGTCAAGTCTCGAACTCTTCCTCCACCCAAGAGAGTAATAGTCAGTATCACTGGTCCTCCTTCTTCAACCTTCTGTTCAAAACACACAACGAGATTTGCAATGTCAAGGAAACAATGCCCGTTAAAGGAGAAATCAGTCAAGTACAAAAAGTTCAGTTCTACAGTGGCTAATATGGATAGTAGGTGGCCTTCAAGGCGACTAGAATACGCAGCCCAAGTGATAGTAGATGCTTTGAAAGAAAACAAAGCAAATAGTTCAGGTTCTGGTGGGATGACTAGGCAAGATGTGAGAGATGCAGCTAGGCTCCACATTGGTGACACAGGTTTGCTGGATTATGTGCTGAAATCACTGAATAATATGATTGTTGGAAACTATATTGTTCGTCGAATGGTCAACCCGACAACTCGAATCCTTGAGTATAACATTCATGAGCATGGAAATGGGTCTAAATCCCCTCAACCACATTCTGGGCTAAAGGTTTTAAATTCTATAGAGACTCCACCAGTAGAGTCAGAACAAGTGCCAGGAATTGATGTTTACAATGATGTAGCTTATCTGTACAAGAATGTCCTATTGGGCTTCCCAGATTCAGAACAAGTAGAATTGGCAGTTCAAACGATTCTAGACAGCAGGCATTTTGTGAAGGAATGGTTTTTAGTCGATGAAATGGAGCAAGTTTTGACATTCATATGCCACTTGATGCCGAACTTTGTTGATGAAAAACCAGAGTTCATGAACAGGGAAGTGTCCCCAGGTGAGATAGTGACAGTTCCACTGCATGCAACAGTTGGAGACTTGAAGCAAGCAGCTGAGACTGCTCTGAAGGATACTTATTGTATTGCAGATGGATTCATGGTGCTAGAGATAACAGAGTTGGCGGGAATAAGTGATGAGGAAGTGCTTTTTGGAGTAGTAGAATCTGGTGTGGATCTGCGTATTAGGGGAATTGGTTCAAGTATGCTGACTACATTGAAGTACCAGGGAGGATCAGACACTTGGAAGGTGAGATGTGAATGTGGAGCTCAAGATGATGATGGTGAGAGAATGGTGGCTTGTGACATGTGTGAGGTGTGGCAGCACACACGGTGCTGTGGGATCGATGACTCTGAGCCTGTACCGCCATTGCTTGTGTGCTCTGCTTGTTGTGATTCACTTGTACCTCCAAGGGTTGATTCTGCCTATTGCAACGATAATAGCATGGACTATGTCTGTGCTGATGATTTTCTGATCTTCCCAGAGTCTAGTAACCTTCTGGAATATGGGTATGGGTACTGA 2112 0.4313 MSFSLLEACKKRKRLPKVFTFHSFADPGCPISSNGPFRDNIRLFLQECGELEDFQIQGMPLWTTGLIHEKSNCMIPLYTIEENVCHSSHPFCDHCRCAGWSGHFVSKRRYHFIIAADNKSLTEGFLDDQSHLLHGMIHSNGYGHLLCINGIEGGSKFLSGREIMDLWDRICTILRTRKIAVEDTSRKRSMDLRLLHGVAYGHSWFGRWGYRFCRGSFGVTEHNYNAAIELLSSLELDEVVQCFGNTTCHKEIKQIIRHYRDMSETQLITIKDLLRFMLTVKSRTLPPPKRVIVSITGPPSSTFCSKHTTRFAMSRKQCPLKEKSVKYKKFSSTVANMDSRWPSRRLEYAAQVIVDALKENKANSSGSGGMTRQDVRDAARLHIGDTGLLDYVLKSLNNMIVGNYIVRRMVNPTTRILEYNIHEHGNGSKSPQPHSGLKVLNSIETPPVESEQVPGIDVYNDVAYLYKNVLLGFPDSEQVELAVQTILDSRHFVKEWFLVDEMEQVLTFICHLMPNFVDEKPEFMNREVSPGEIVTVPLHATVGDLKQAAETALKDTYCIADGFMVLEITELAGISDEEVLFGVVESGVDLRIRGIGSSMLTTLKYQGGSDTWKVRCECGAQDDDGERMVACDMCEVWQHTRCCGIDDSEPVPPLLVCSACCDSLVPPRVDSAYCNDNSMDYVCADDFLIFPESSNLLEYGYGY 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01359 703 CDD PHD_MMD1_like 616 660 - -
Accr4g01359 703 ProSitePatterns Zinc finger PHD-type signature. 616 660 IPR019786 -
Accr4g01359 703 SUPERFAMILY FYVE/PHD zinc finger 608 666 IPR011011 -
Accr4g01359 703 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 601 664 IPR013083 -
Accr4g01359 703 PANTHER PHD FINGER PROTEIN MALE MEIOCYTE DEATH 1-RELATED 9 668 - -
Accr4g01359 703 SMART PHD_3 615 661 IPR001965 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01359 Accr-Chr4 13355618 13358027 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01359 10 666 PHD Transcription Factor Family AT5G22260 33.380 4.54e-115 359
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01359 K26271 - qsa:O6P43_014263 956.822