Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01356 ATGAAAAAAGCATACTTTGATCTTGAAGTGGAGGCCTCCGCAGAAGAAAGTGAAGTTGAAGTCAGCAGCCAGACTGCTTCCAATATATCCACTCAAGAAACTATTGCAGATCCTTGTATTGATCAAAACCTGTCCAACTCTTCCACCCCAAGAAATCCAACAGAGATAATTGATTTAAATTCAACTCCCATTTCACTTGATCTGACTCTAAACTTAAACAGTAAACCATTAGCAGTGTCAAGAGATTCTGTGCGACGCTCATTGTCTAGCACTAGTGAGAGTAGCAATGAACCTGCCTCTCAAACTACAGAAGCGACCATGACCAGAATTTTTACATGCTATTACTGTCAACGCAAGTTTGTCAGCTCGCAGGCTCTCGGAGGCCACCAAAACGCACACAAGAGGGAAAGATCAATGGCAAAGAATGCTGTGAGGATGGGTTTTTTCCCTCAGAGGTATCCAAACAATCTGGAAGCTATCCCTCTTCATGTTCCTCCCAGATCATTGGGCATGAAACCACACTCTTCACAGCACTGTGTCATTTCACCAAGAAGTAAGGTTCAAGAGATGAAAAACAATGCAGGATTTGAGGTAGGGTATTATGGTCAGCCAATTTTCTTTGGGAATAATCAATCTGGGATTGCTTGGCCTGGTGGTTTCCGTCAGATGGCTGACATAGGTGATGATCACAAGAATTTTCTGCTGACTGAAAGTTCTGATATGAGTTTTAGGGAGGTGAATCCACCAGTAGACGTAGAGAAGTCCACCCCAGATTTGACATTAAAACTTTGA 792 0.4268 MKKAYFDLEVEASAEESEVEVSSQTASNISTQETIADPCIDQNLSNSSTPRNPTEIIDLNSTPISLDLTLNLNSKPLAVSRDSVRRSLSSTSESSNEPASQTTEATMTRIFTCYYCQRKFVSSQALGGHQNAHKRERSMAKNAVRMGFFPQRYPNNLEAIPLHVPPRSLGMKPHSSQHCVISPRSKVQEMKNNAGFEVGYYGQPIFFGNNQSGIAWPGGFRQMADIGDDHKNFLLTESSDMSFREVNPPVDVEKSTPDLTLKL 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01356 263 SUPERFAMILY beta-beta-alpha zinc fingers 108 139 IPR036236 -
Accr4g01356 263 MobiDBLite consensus disorder prediction 80 103 - -
Accr4g01356 263 Gene3D Classic Zinc Finger 87 148 - -
Accr4g01356 263 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 21 187 IPR044246 GO:0009788
Accr4g01356 263 ProSitePatterns Zinc finger C2H2 type domain signature. 113 133 IPR013087 -
Accr4g01356 263 ProSiteProfiles Zinc finger C2H2 type domain profile. 111 138 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01356 Accr-Chr4 13322823 13323614 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01356 6 263 C2H2 Transcription Factor Family AT1G66140 37.102 1.93e-31 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Accr4g01356 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01356 - - gmx:100788768 271.166