Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01354 ATGCCCTTACAAGGGATAGCCGTCGAGCCCAGTTCCACAACATGTTCTCTTCCTGATCTTTCCCTTCACATAAGCCCTCCTCCTCCTCCTCCTTCTTCGTTTTTGGCAAATCAAGCTCGTACTGATCTCTCTCTAGCCCCCAATTTCTTCACAGACCAACCTCCTCCTCTTTATTATCATTCTCATCCTCAAAATCACAACCCCACCACAGCCTCTCACTTATTCAACCACATGAATCCGCCACCGTCCGATGTCAGCCTGAGACCCATCAAGGGGATTCCGATGTATCACAACCACCACCGCTGCTTCCCTTTCTTGCCCATGGACCATCCCACAGGCAAGGATCTTCATCATCATCACAAGATGTGGTTGCATCATCCTCCTAACACTTCTTCTTCTTGGGGTTATAATCATAATCATAATAATCATACCATGGGAGGAGTATCGGGTTTGGATAATCCGATGTGGGTCTTAAACGGGTTGCCGTCTAATTTGAAACCTCATAATCATCAGTTACACTATGGAGTTGGGGTAGGGGCTTCTCATCATCATCATCACAGTGAAGAGGCCAATACATCTTCATCAGGGTTCATGATGAGATCGAGATATATGCCGAAACTACCCTCCAAGAGAAGCATGAGAGCTCCCAGAATGCGTTGGACTACCACCCTTCATGCCAGATTCGTTCACGCTGTTCAACTTCTTGGCGGCCATGAAAGAGCAACTCCAAAGTCAGTTCTGGAGCTGATGGATGTGAAAGATCTCACATTAGCTCATGTTAAAAGCCACTTGCAGATGTATAGAACAGTCAAGACCACTGACAAGCCTGCTGCTTCATCAGGCCAATCAGATGGATCTGGTGAAGATGACATGTCTCCGATGGGTGGCAACGCGGACCGTGGCGGTCTTAGTCATTTTTCCGATCAAAGAGGCCGAGCAGATCGGTCTGTGCAACAAGACATAGACCATCCTTCTTCCAATACTTTATGGAGTAATTCTTCAAGAGAGGCATGGCCACAGAATAATTGTTATGATATGGATGGTCTCAGAAAAACTACCTTCCACTCACAATCAACGTCAAGATCAGGCCATCAAACTCAGGAATGTAATTCAAGCGAAGCACGACTACTACTGAAGAACAGTTTGTCGCATGTGAGTATAGAATGCAGTAAGGATCCAAATTTGGAGTTTACATTAGGAAGACCAGATTGGAATGGCAAATGA 1224 0.4592 MPLQGIAVEPSSTTCSLPDLSLHISPPPPPPSSFLANQARTDLSLAPNFFTDQPPPLYYHSHPQNHNPTTASHLFNHMNPPPSDVSLRPIKGIPMYHNHHRCFPFLPMDHPTGKDLHHHHKMWLHHPPNTSSSWGYNHNHNNHTMGGVSGLDNPMWVLNGLPSNLKPHNHQLHYGVGVGASHHHHHSEEANTSSSGFMMRSRYMPKLPSKRSMRAPRMRWTTTLHARFVHAVQLLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKPAASSGQSDGSGEDDMSPMGGNADRGGLSHFSDQRGRADRSVQQDIDHPSSNTLWSNSSREAWPQNNCYDMDGLRKTTFHSQSTSRSGHQTQECNSSEARLLLKNSLSHVSIECSKDPNLEFTLGRPDWNGK 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01354 407 MobiDBLite consensus disorder prediction 305 319 - -
Accr4g01354 407 Pfam Myb-like DNA-binding domain 217 268 IPR001005 -
Accr4g01354 407 SUPERFAMILY Homeodomain-like 213 269 IPR009057 -
Accr4g01354 407 MobiDBLite consensus disorder prediction 269 287 - -
Accr4g01354 407 MobiDBLite consensus disorder prediction 320 337 - -
Accr4g01354 407 Gene3D - 215 272 - -
Accr4g01354 407 FunFam Myb family transcription factor 214 272 - -
Accr4g01354 407 MobiDBLite consensus disorder prediction 179 199 - -
Accr4g01354 407 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 18 406 IPR044847 GO:0000976|GO:0006355|GO:0010158
Accr4g01354 407 MobiDBLite consensus disorder prediction 269 337 - -
Accr4g01354 407 NCBIfam myb-like DNA-binding domain, SHAQKYF class 216 269 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01354 Accr-Chr4 13302480 13307338 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01354 1 407 G2-like Transcription Factor Family AT5G16560 42.369 2.90e-72 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Accr4g01354 Myb_DNA-binding 1.7e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01354 - - lja:Lj0g3v0089499.2 340.887