Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01353 ATGCCCTTACAAGGGATAGCCGTCGAGCCCAGTTCCACAACATGTTCTCTTCCTGATCTTTCCCTTCACATAAGCCCTCCTCCTCCTCCTCCTTCTTCGTTTTTGGCAAATCAAGCTCGTACTGATCTCTCTCTAGCCCCCAATTTCTTCACAGACCAACCTCCTCCTCTTTATTATCATTCTCATCCTCAAAATCACAACCCCACCACAGCCTCTCACTTATTCAACCACATGAATCCGCCACCGTCCGATGTCAGCCTGAGACCCATCAAGGGGATTCCGATGTATCACAACCACCACCGCTGCTTCCCTTTCTTGCCCATGGACCATCCCACAGGCAAGGATCTTCATCATCATCACAAGATGTGGTTGCATCATCCTCCTAACACTTCTTCTTCTTGGGGTTATAATCATAATCATAATAATCATACCATGGGAGGAGTATCGGGTTTGGATAATCCGATGTGGGTCTTAAACGGGTTGCCGTCTAATTTGAAACCTCATAATCATCAGTTACACTATGGAGTTGGGGTAGGGGCTTCTCATCATCATCATCACAGTGAAGAGGCCAATACATCTTCATCAGGGTTCATGATGAGATCGAGATATATGCCGAAACTACCCTCCAAGAGAAGCATGAGAGCTCCCAGAATGCGTTGGACTACCACCCTTCATGCCAGATTCGTTCACGCTGTTCAACTTCTTGGCGGCCATGAAAGAGCAACTCCAAAGTCAGTTCTGGAGCTGATGGATGTGAAAGATCTCACATTAGCTCATGTTAAAAGCCACTTGCAGATGTATAGAACAGTCAAGACCACTGACAAGCCTGCTGCTTCATCAGGCCAATCAGATGGATCTGGTGAAGATGACATGTCTCCGATGGGTGGCAACGCGGACCGTGGCGGTCTTAGTCATTTTTCCGATCAAAGAGGCCGAGCAGATCGGTCTGTGCAACAAGACATAGACCATCCTTCTTCCAATACTTTATGGAGTAATTCTTCAAGCAGAGAGGCATGGCCACAGAATAATTGTTATGATATGGATGGTCTCAGAAAAACTACCTTCCACTCACAATCAACGTCAAGATCAGGCCATCAAACTCAGGAATGTAATTCAAGCGAAGCACGACTACTACTGAAGAACAGTTTGTCGCATGTGAGTATAGAATGCAGTAAGGATCCAAATTTGGAGTTTACATTAGGAAGACCAGATTGGAATGGCAAATGA 1227 0.4597 MPLQGIAVEPSSTTCSLPDLSLHISPPPPPPSSFLANQARTDLSLAPNFFTDQPPPLYYHSHPQNHNPTTASHLFNHMNPPPSDVSLRPIKGIPMYHNHHRCFPFLPMDHPTGKDLHHHHKMWLHHPPNTSSSWGYNHNHNNHTMGGVSGLDNPMWVLNGLPSNLKPHNHQLHYGVGVGASHHHHHSEEANTSSSGFMMRSRYMPKLPSKRSMRAPRMRWTTTLHARFVHAVQLLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKPAASSGQSDGSGEDDMSPMGGNADRGGLSHFSDQRGRADRSVQQDIDHPSSNTLWSNSSSREAWPQNNCYDMDGLRKTTFHSQSTSRSGHQTQECNSSEARLLLKNSLSHVSIECSKDPNLEFTLGRPDWNGK 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01353 408 MobiDBLite consensus disorder prediction 305 319 - -
Accr4g01353 408 Pfam Myb-like DNA-binding domain 217 268 IPR001005 -
Accr4g01353 408 SUPERFAMILY Homeodomain-like 213 269 IPR009057 -
Accr4g01353 408 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 18 407 IPR044847 GO:0000976|GO:0006355|GO:0010158
Accr4g01353 408 MobiDBLite consensus disorder prediction 269 287 - -
Accr4g01353 408 MobiDBLite consensus disorder prediction 269 345 - -
Accr4g01353 408 Gene3D - 215 272 - -
Accr4g01353 408 FunFam Myb family transcription factor 214 272 - -
Accr4g01353 408 MobiDBLite consensus disorder prediction 179 198 - -
Accr4g01353 408 MobiDBLite consensus disorder prediction 320 341 - -
Accr4g01353 408 NCBIfam myb-like DNA-binding domain, SHAQKYF class 216 269 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01353 Accr-Chr4 13302480 13307338 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01353 1 408 G2-like Transcription Factor Family AT5G16560 42.273 1.68e-70 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Accr4g01353 Myb_DNA-binding 1.7e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01353 - - lja:Lj0g3v0089499.2 345.125