Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01345 ATGGCTCTGTCAAAGACAGCCACAGAGACGGACGGTTCCGTTCACTCGACGTTCGCGTCGAGGTACGTGAGAGCGCCGCTGCCCAAGTTCAAGATGGCGGAGCATTCGATCGCCAAGGAGGCGGCTTACCAGATGATAAACGACGAGCTCATGCTCGACGGTAATCCCAGGCTCAATCTCGCCTCCTTCGTCACCACCTGGATGGAACCTGAGTGCGACAAGCTCATCATGTCCGCCATCAACAAGAATTTCGTCGACATGGATGAGTATCCAGTCACCACCGACCTCCAGAATCGGTGTGTGAACATGATAGCCCATCTTTTCAATGCGCCGCTTCAAGAATCAGAACCTGCGGTGGGTGTTGGCACAGTTGGCTCATCGGAGGCCATCATGTTGGCTGGCTTGGCTTTCAAGCGAAAGTGGCAGAACAGAAGAAAAGCAGAGGGCAAGCCCATTGACAAACCCAATATTGTTACTGGCGCTAATGTTCAGGTTTGCTGGGAGAAATTTGCAAGGTACTTCGAGGTGGAGCTGAAAGAGGTGAAGCTGAGGGAAGATTACTTCGTAATGGATCCTGAAAAGGCAGTGGAAATGGTGGATGAGAACACCATCTGTGTTGCTGCCATCCTCGGTTCCACCCTCAATGGAGAATTCGAAGATGTCAAACGCTTAAATGATCTACTCATTGAGAAGAATAATGAAACTGGGTGGGATACAACAATTCATGTGGATGCGGCCAGTGGAGGCTTCATCGCACCATTTTTATATCCAGACCTTGAATGGGACTTTCGGTTGCCACTTGTGAAGAGCATCAACGTTAGTGGACACAAGTATGGACTTGTGTACGCAGGCATCGGTTGGGTCATTTGGAGAAGTAAAGATGATTTGCCTGACGAGCTCATCTTCCACATTAACTACCTTGGAGCTGATCAACCCACCTTCACCCTCAACTTCTCCAAAGGTTCTAGTCAAGTCATTGCTCAGTACTACCAGCTCATCCGCTTGGGCTATGAGGGATATAGGAATGTGATGGAAAATTGCAGAGACAACATGATAGTGCTGAAAGAGGGATTGGAGATAACAGGGCGTTTTAACATCGTATCAAAAGACGATGGATTGCCATTAGTGGCCTTCACTTTAAAGGATCGCAGCCACTTTAATGAATTCCAGATCTCAGATTTCTTGAAGCGCTATGGCTGGATCGTTCCAGCCTATACTATGCCTCCCGACGCTCAGAGCATCACCGTCATCCGCGTCGTCATCAGAGAGGATTTTTCTCGAACACTCGCCGAGCGTCTCGTCATTGATATTCAGAAAGTCTTGCACGACCTCGATTTGCTCTCCGGTCATACCGTCGTCAAGAAGAGTGAACACGAGACCCAAAAAGAAATCACTACGGCCTGGAGGAAGTTCGTAGCCGACAGGAAGAAGATGAACTTGAAGACGAATGGTGTTTGTTAA 1461 0.4873 MALSKTATETDGSVHSTFASRYVRAPLPKFKMAEHSIAKEAAYQMINDELMLDGNPRLNLASFVTTWMEPECDKLIMSAINKNFVDMDEYPVTTDLQNRCVNMIAHLFNAPLQESEPAVGVGTVGSSEAIMLAGLAFKRKWQNRRKAEGKPIDKPNIVTGANVQVCWEKFARYFEVELKEVKLREDYFVMDPEKAVEMVDENTICVAAILGSTLNGEFEDVKRLNDLLIEKNNETGWDTTIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRSKDDLPDELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGYEGYRNVMENCRDNMIVLKEGLEITGRFNIVSKDDGLPLVAFTLKDRSHFNEFQISDFLKRYGWIVPAYTMPPDAQSITVIRVVIREDFSRTLAERLVIDIQKVLHDLDLLSGHTVVKKSEHETQKEITTAWRKFVADRKKMNLKTNGVC 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01345 486 PANTHER GLUTAMATE DECARBOXYLASE 1 471 IPR010107 GO:0004351|GO:0006536|GO:0030170
Accr4g01345 486 Gene3D - 66 359 IPR015421 GO:0003824
Accr4g01345 486 SUPERFAMILY PLP-dependent transferases 12 444 IPR015424 -
Accr4g01345 486 FunFam Glutamate decarboxylase 66 360 - -
Accr4g01345 486 Pfam Pyridoxal-dependent decarboxylase conserved domain 38 381 IPR002129 GO:0016830|GO:0019752|GO:0030170
Accr4g01345 486 Gene3D - 1 65 - -
Accr4g01345 486 Gene3D - 361 447 - -
Accr4g01345 486 FunFam Glutamate decarboxylase 1 65 - -
Accr4g01345 486 FunFam Glutamate decarboxylase 361 448 - -
Accr4g01345 486 NCBIfam glutamate decarboxylase 16 444 IPR010107 GO:0004351|GO:0006536|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01345 Accr-Chr4 13237640 13239932 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01345 1 486 Calmodulin-binding Proteins AT5G17330 80.435 0.0 850
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01345 K01580 - gmx:100796533 857.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr4g01345 4 13237640 13239932 Accr4g01345 4 13237640 13239932 ECH