Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01342 ATGGCTATTCAGGATCGTAATGAAGTTTTTAGATACAATGGTCTTCCGCTAGAAAGTGGAGGATCTCTGAGTTCTGGACTAGGTTCTGCTTCACGTGTTGAACAAAAGGATCAGATTTCTCGTGGAAAAGAACGTGTTCCAAAGGTAAGAAAACCATACACCATCACGAAACAGAGGGAGCGATGGACAGACGAAGAGCATGAGAAATTCATTGAAGCTCTGAAGCTCTATGGCAGGGCATGGCGAAATATTGAAGAACATATTGGCACAAAGACAGCAGTTCAGATTCGAAGCCATGCTCAGAAGTATTTCACAAAGGTTGTTCGCGAGTCTAGCGGGAAAAGCATAATAAGCACAGTGGAGTCCATTGAAATCCCACCTCCACGACCAAAGAAAAGGCCTTCTCATCCTTACCCTCGCAAGCGGGTAGTGTTCCCTGATACAGCAATCTCCAATGAAGGCAAGGCACTGAGATCTATTTCTCTCAAGTCATTAGAATCTGATCAAGAAAACCAGTCTCCAAAATCAGTATTATCTACGATTGGCTTGGACACTCCTGGATACTCTGAACCAAATGGAACTTCATCTGAGGAGGATGGTTCTGCCCCAAATGCCGATTCATTGCTTGATCCACAGACTCCTCTGAAATTTGAGTTTTTCCCCAAGGGAAGTGTTTATGCCAGAGAAGACGTAGCTGAGGAACCTTATGGTCGGGTTGTTAAGCTTTTTGGGGCTAACCTTCTGGCTATAGATGGTTGTCCAACAAAGAAGAATTATGATATAACAGAAGCTCCTGTTGGTTTTGCTCCTCGGAGAACTCGAGTTGAAGATAAAGTTGAAAAGGAATTATCTTGGGGTGGTTCAAACATGACTAGCTCTGTAAATGATGGTGACATTAATGATGAAAACCCAGATGATGTTGAAGCCAGAAGTCACATGCATTTCTCTGGAGACTTGACAACCCCCAGAGAACCATCAACCATATCTGAATTATTGGTGAGGTCTAAAGGGTTTGTGCCATATAAAAAATTCTTAGCCGAGAGAGAAAATCAGCCCTTTCCTATAACAGCCGAGGAGAGGGATTGCCAAAGCATTCGCCTTTCTTTATAG 1110 0.4324 MAIQDRNEVFRYNGLPLESGGSLSSGLGSASRVEQKDQISRGKERVPKVRKPYTITKQRERWTDEEHEKFIEALKLYGRAWRNIEEHIGTKTAVQIRSHAQKYFTKVVRESSGKSIISTVESIEIPPPRPKKRPSHPYPRKRVVFPDTAISNEGKALRSISLKSLESDQENQSPKSVLSTIGLDTPGYSEPNGTSSEEDGSAPNADSLLDPQTPLKFEFFPKGSVYAREDVAEEPYGRVVKLFGANLLAIDGCPTKKNYDITEAPVGFAPRRTRVEDKVEKELSWGGSNMTSSVNDGDINDENPDDVEARSHMHFSGDLTTPREPSTISELLVRSKGFVPYKKFLAERENQPFPITAEERDCQSIRLSL 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01342 369 MobiDBLite consensus disorder prediction 18 35 - -
Accr4g01342 369 CDD SANT 61 104 IPR001005 -
Accr4g01342 369 MobiDBLite consensus disorder prediction 165 208 - -
Accr4g01342 369 SUPERFAMILY Homeodomain-like 53 107 IPR009057 -
Accr4g01342 369 PANTHER SWI/SNF COMPLEX-RELATED 44 194 - -
Accr4g01342 369 FunFam protein REVEILLE 6 isoform X1 61 109 - -
Accr4g01342 369 MobiDBLite consensus disorder prediction 16 48 - -
Accr4g01342 369 NCBIfam myb-like DNA-binding domain, SHAQKYF class 57 106 IPR006447 GO:0003677
Accr4g01342 369 SMART sant 58 106 IPR001005 -
Accr4g01342 369 ProSiteProfiles SANT domain profile. 57 108 IPR017884 -
Accr4g01342 369 Pfam Myb-like DNA-binding domain 59 104 IPR001005 -
Accr4g01342 369 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 54 108 IPR017930 -
Accr4g01342 369 ProSiteProfiles Myb-like domain profile. 54 104 IPR001005 -
Accr4g01342 369 MobiDBLite consensus disorder prediction 119 145 - -
Accr4g01342 369 Gene3D - 61 108 - -
Accr4g01342 369 MobiDBLite consensus disorder prediction 165 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01342 Accr-Chr4 13178401 13180383 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Accr4g01342 Myb_DNA-binding 4.2e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01342 - - pcin:129299230 463.381