Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01340 ATGGCTGGTGCAGTAGTTCTTTTGGACTTCTGGGCAAGTCCATTCTGCTTGAGAGCCAGAATCACTCTTGAAGAAAAGGGTGTGGCTTATGAGAGCAGGGAAGAAGAGAACTTGCTTGGACAAAAGAGTGAGCTTTTACTCAACTCTAATCCCATTCACAAGACAGTCCCTGTCTTGCTTCACAATGGTCGGCCTGTGTTGGAGTCTGCTAATATTGTTGCTTACATCGACGAGGCCTTTCCTTCCAAACCTCTGCTTCCAACTACCCCATACGAGCGTGCCCAAGCTCGTTTCTGGGCTGACTATATTGACAAATCAGTATTTGTAACTGGAAAGGGAATCTGGCTAAGCAAGGGAGCAGAAGAGAGAGAAGCGGCCGTGAAGAGCTTGATTGAAGATGTCAAGAACCTAGAAGGAGCTCTAGGTGACAAAGATTTCTTTGGTGGAGATGCCTTTGGGTATGTGGACATCATAGCATTGGGTCCAACCTCATGGTTTCATGCTTATGAGATGATTGGGGCATTCAAATTGGAAGACCATTGTCCCAAATTCTCATCCTGGTTGAAAAGATGCTTGCAGAGGCCCTCTGTTGCCAAAACCTATCCAGACACTGAAAAAGTTCACCAGCTTGTTCTCAAATTAGCTGAGATGTTCGGTTAA 660 0.4576 MAGAVVLLDFWASPFCLRARITLEEKGVAYESREEENLLGQKSELLLNSNPIHKTVPVLLHNGRPVLESANIVAYIDEAFPSKPLLPTTPYERAQARFWADYIDKSVFVTGKGIWLSKGAEEREAAVKSLIEDVKNLEGALGDKDFFGGDAFGYVDIIALGPTSWFHAYEMIGAFKLEDHCPKFSSWLKRCLQRPSVAKTYPDTEKVHQLVLKLAEMFG 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01340 219 FunFam Glutathione S-transferase GSTU6 1 86 - -
Accr4g01340 219 Coils Coil 120 140 - -
Accr4g01340 219 Pfam Glutathione S-transferase, C-terminal domain 106 195 IPR004046 -
Accr4g01340 219 CDD GST_N_Tau 5 80 - -
Accr4g01340 219 SUPERFAMILY Thioredoxin-like 5 107 IPR036249 -
Accr4g01340 219 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 208 IPR045073 -
Accr4g01340 219 ProSiteProfiles Glutaredoxin domain profile. 1 93 - -
Accr4g01340 219 Gene3D - 89 219 - -
Accr4g01340 219 CDD GST_C_Tau 90 214 IPR045074 GO:0004364|GO:0006749
Accr4g01340 219 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 84 IPR004045 -
Accr4g01340 219 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 214 IPR010987 -
Accr4g01340 219 Pfam Glutathione S-transferase, N-terminal domain 7 84 IPR004045 -
Accr4g01340 219 SFLD Main.3: Omega- and Tau-like 3 217 IPR045073 -
Accr4g01340 219 SFLD Glutathione Transferase (cytosolic) 3 217 IPR040079 -
Accr4g01340 219 Gene3D Glutaredoxin 2 88 - -
Accr4g01340 219 SUPERFAMILY GST C-terminal domain-like 78 217 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01340 Accr-Chr4 13153161 13154064 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01340 1 219 Glutathione S-transferase Gene Family AT1G17180 54.091 1.80e-81 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01340 K00799 - mnt:21384955 285.419