Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01336 ATGGCACCTGTTTCACTGCCTCCTGGTTTTAGGTTCCACCCAACGGATGAAGAGCTGGTTGCTTATTATCTCAAAAGAAAGATCAATGGCCACAGGATTGAGTTAGAGATCATCCCCGAAGTTGATCTTTACAAGTGCGAACCCTGGGACTTGCCTGGAAAATCGTTGTTACCGGGAAAAGATTTGGAGTGGTATTTTTTCGGTCCTCGAGATAGGAAGTACCCAAATGGGTCAAGAACAAACAGAGCCACAAAATCGGGATATTGGAAAGCCACAGGAAAAGACAGGAAAGTGAATTCTCAATCTCGTTCAGTGGGCATGAAGAAAACCCTAGTTTACTATCGAGGTCGAGCCCCTCATGGATGTCGTACCAACTGGGTCATGCATGAGTATCGTCTTGACGAAAACGAATGTGAAGTTGCTTCTGGCATTCAGGATGCTTATGCTCTCTGTCGTGTGTTCAAGAAGACAGCCGTTATGACCACGAAAATAGGAGAGCATTACGTGAATGATGGGTCAAATCAGGTTATGAATACAAGTGATCAGTCATCTAGCATTGAATTATACTCTGAAGGAAGATCAGGAGAAGATTTAGAGAGCTCAGATTATTTGATGCCTCTGGATCATCATAATATCTCATCACCCCATATTGGAAATCCCTCTTCAGAACCAAGAGATCATGGGAAATGGTCACAGACACAGTTCTTTTCTGAAGAAGATCCTTTCTCTCTCCCAAATTCTTCTTCATTATTTTCCAACCATGGGTCCATACCATACCCTCCTTCCAAGGTGGATATTGCACTGGAATGTGCCAGGATGCAGCATAGGTTTTCTTCAATGGAGGACTTGCCTTCTGAACTGATGAAGATGCAAGCACAATATGGTGGGACCAGGAATGAAACTGATGAGTTATTACATGAGATTCTTTCAGTTGCTCATGCTTCTCAGGAACTCATAAACCAGTCTTCTGATTACTATTCTTCTCATTCATTGGGTACTACTAGTACTGCAGCAAATCAGCATTATTATGCTCCTAATTCTGAACAAGAAGATGGTTTCACTTTCATGGTTGGCAGAGATAGTACTGCTAATGACTATGACTATTATAGTAATGCCTGCTGGAAAGATCCTGTAAACACAAGGTCCATAGAGATTGGAGATCTGGATGATGATTTCAAAGCAGAGAGGATTGTCGAGAATTTAAGATGGGTTGGCATGTCAAGCAAGGATCTGGAAATTAAGAGCTACATGGAAGATCAGAAAGTTGTTCCAATTGAGGATATTTCAAATTTCCAAGCAAATAGGGAGGGAAATGAACTGCTGCAAGAATGTGATAATCAGCAAGAAAATAGCAGCAAGCAGGAACTGAATGACACAGACATAAACGACGACATGTCATTAGTGTTCATCAACGAGGATGACGCTAATAATGATAACTTGATAGATGAAGAAGGCGATGATGATTATTCGAGTTCTCCAAGCTTTGAGGTGGTAGAAGAAGTCAAAGTTAGCCACGGAATGTTTGTGTCCACAAGACAAGTAGCCGACACATTCTTTCACCAAATAGTTCCTTCACAAACCCTCAAGGTTCACCTCAATCCAGTGATAATGACACACAATAATTATCACTCAGTGGAGAACATAGAGACAGTTTCTTTCTTTAGAAACTTGAAGGCCTCTGTGATGAAGACGATAACAAGTCCCATTGTGTTCATTTTTTCACTTCTGCTGATGACTTGTATTTATTATTCATCAGATTCTGATCATCAGGATGTGAAGGATAGAATTTGGAGTACTGTTAATTGCAATAATAGCATGGAGAGAGTGATGGGAGAATATGAAGAAGATGATGAGAAGCAAGAAGTCTGGTTTGTGGGCATCAAAAGTGAAAAAGGGTTCAGTGTGGTGTTGAAGAAGATAGGAATTTTTCTCACAATTTCTTTTGCTCTTTGTACCATGTGGGCTAACCACATCATTGTTCATTAA 1986 0.4074 MAPVSLPPGFRFHPTDEELVAYYLKRKINGHRIELEIIPEVDLYKCEPWDLPGKSLLPGKDLEWYFFGPRDRKYPNGSRTNRATKSGYWKATGKDRKVNSQSRSVGMKKTLVYYRGRAPHGCRTNWVMHEYRLDENECEVASGIQDAYALCRVFKKTAVMTTKIGEHYVNDGSNQVMNTSDQSSSIELYSEGRSGEDLESSDYLMPLDHHNISSPHIGNPSSEPRDHGKWSQTQFFSEEDPFSLPNSSSLFSNHGSIPYPPSKVDIALECARMQHRFSSMEDLPSELMKMQAQYGGTRNETDELLHEILSVAHASQELINQSSDYYSSHSLGTTSTAANQHYYAPNSEQEDGFTFMVGRDSTANDYDYYSNACWKDPVNTRSIEIGDLDDDFKAERIVENLRWVGMSSKDLEIKSYMEDQKVVPIEDISNFQANREGNELLQECDNQQENSSKQELNDTDINDDMSLVFINEDDANNDNLIDEEGDDDYSSSPSFEVVEEVKVSHGMFVSTRQVADTFFHQIVPSQTLKVHLNPVIMTHNNYHSVENIETVSFFRNLKASVMKTITSPIVFIFSLLLMTCIYYSSDSDHQDVKDRIWSTVNCNNSMERVMGEYEEDDEKQEVWFVGIKSEKGFSVVLKKIGIFLTISFALCTMWANHIIVH 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01336 661 MobiDBLite consensus disorder prediction 214 230 - -
Accr4g01336 661 MobiDBLite consensus disorder prediction 175 230 - -
Accr4g01336 661 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
Accr4g01336 661 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Accr4g01336 661 SUPERFAMILY NAC domain 4 156 IPR036093 GO:0003677|GO:0006355
Accr4g01336 661 FunFam Nac domain-containing protein 86 15 159 - -
Accr4g01336 661 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 273 - -
Accr4g01336 661 MobiDBLite consensus disorder prediction 175 190 - -
Accr4g01336 661 Gene3D NAC domain 15 159 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01336 Accr-Chr4 13133153 13136895 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01336 1 653 NAC Transcription Factor Family AT1G65910 45.655 4.66e-170 498
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Accr4g01336 NAM 9.2e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01336 - - pcin:129318732 1040.41