Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01333 ATGGAAGAAGAAGAAGAAGGAAGCCTAGCAAGCTTCCTAAGATGGGCAGGAGAGCTTGGAATTTCAGATGCAGCAATCACCAATCCACCTCAACATTGTCCTTCACGTCTGGGTTATTCTCTCTGCGTCTCCCATTTTCCTCATTCTGGCGGTAGAGGTTTGGGTGCTGTGCGAGATCTCAGGAGGGGAGAATTGATCCTTAGAGTTCCAAAATCTGCCTTAATGACATCAGAGAATTTCATGCAAGATAAGAAGCTCTCAATTGCTGTTAATAACCACCGTTATCTCTCATCCTCTCAGATATTGATCGTTTGCTTATTATATGAATTGAGCAAGGGAAAATCTTCAAAGTGGCATCCTTACCTCATTCATTTGCCACATACTTATGACATCCTCGCTACATTTGGTGAATTTGAGAAACAAGCTCTTCAAGTGGATGAGGCTCGGTGGGTCACGGAAAAGGCTGTATTGAAGGCCAAATCAGAGTGGAAAGAAGCCAATGCTTTGATGGAAGAAATCAAACTTAAGTCCCAACTTTTAACGTTCAAGGCATGGCTTTGGGCTACTGCAACGATATCTTCCCGTACGTTGCACATACCATGGGATGAAGCTGGCTGTTTATGCCCTGTGGGTGACTTGTTTAATTATGATGCACCTGGAAGGGAGCCATCTGATCCTGAAGATAAGGAGATTCTATCATCCATATCTTCCTTCCAAGTCAATTCTATCTCAAATGTAGAGAATACTTTTACGTTAGACGCAGAGGAGCTTGATCCTCATTCTCAGAGGCTAACAGATGGTGGGTTTGAGGAAGATGTTAATTCATATTGCTTTTATGCTAGGGAAAATTACAAGCAAGGAGAGCAGGTTTTATTATGCTATGGACTGTACACAAATTTAGAGCTTCTTGAACACTATGGTTTTCTCCTACAAGAAAATCCAAACGACAAAATTTTTATTCCTCTTGAATCTGCTGTATATTCTTCCAGTTCATGGCCTAAAGAGTCGCTCTATATTTGCCATGATGGGAAGCCTTCCTTCGCATTACTGTCGGCATTGAGGTTGTGGGCGACCCCTAAAAATAAGCGCAAGTCTGTTGGGCATCTTGTGTATTCCGGTTCTCAGTTGTCTGTGGACAATGAAATTGTTGTCATGAAATGGCTGTCAAAGACTTGCGACTCTGCGTTGAATAGTTTGCCGACATCGATTGATGAAGACACAATACTCCTGAATGCAATGGATAATAGCCAAGATTTTTGTAGGTTCATGGAAATTACCAAACTGTTGTCTTCTAGGGATGAGATTTGTTCATTTTTGAAAGTTGATAATCTGCACGATAGCCATGATTTAACTGATGTACTAGTATCCAGAAAAGTCAGAAGGTCCATGGACAAGTGGAAACTGGCTGTTCTATGGCGGCTTAGGTATAAAAAAGTCCTTGCGAATTGTATCTCTTATTGCAATGAAATACTTGAGTCTCTCTTGACGTAA 1491 0.4145 MEEEEEGSLASFLRWAGELGISDAAITNPPQHCPSRLGYSLCVSHFPHSGGRGLGAVRDLRRGELILRVPKSALMTSENFMQDKKLSIAVNNHRYLSSSQILIVCLLYELSKGKSSKWHPYLIHLPHTYDILATFGEFEKQALQVDEARWVTEKAVLKAKSEWKEANALMEEIKLKSQLLTFKAWLWATATISSRTLHIPWDEAGCLCPVGDLFNYDAPGREPSDPEDKEILSSISSFQVNSISNVENTFTLDAEELDPHSQRLTDGGFEEDVNSYCFYARENYKQGEQVLLCYGLYTNLELLEHYGFLLQENPNDKIFIPLESAVYSSSSWPKESLYICHDGKPSFALLSALRLWATPKNKRKSVGHLVYSGSQLSVDNEIVVMKWLSKTCDSALNSLPTSIDEDTILLNAMDNSQDFCRFMEITKLLSSRDEICSFLKVDNLHDSHDLTDVLVSRKVRRSMDKWKLAVLWRLRYKKVLANCISYCNEILESLLT 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01333 496 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 8 426 - -
Accr4g01333 496 FunFam Protein SET DOMAIN GROUP 40 313 432 - -
Accr4g01333 496 CDD SET_LSMT 40 309 - -
Accr4g01333 496 Pfam SET domain 51 295 IPR001214 GO:0005515
Accr4g01333 496 SUPERFAMILY SET domain 43 313 IPR046341 -
Accr4g01333 496 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 305 421 IPR036464 -
Accr4g01333 496 Gene3D - 308 495 IPR036464 -
Accr4g01333 496 ProSiteProfiles SET domain profile. 39 295 IPR001214 GO:0005515
Accr4g01333 496 Pfam Rubisco LSMT substrate-binding 344 480 IPR015353 -
Accr4g01333 496 Gene3D set domain protein methyltransferase, domain 1 7 307 - -
Accr4g01333 496 FunFam Protein SET DOMAIN GROUP 40 9 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01333 Accr-Chr4 13101789 13104429 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01333 51 323 NAC Transcription Factor Family AT3G56570 24.127 6.18e-08 53.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Accr4g01333 SET 1.9e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01333 - - gmx:100787452 747.273