Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01301 ATGTATCTTTCGAAGGTTTGGCAGTATGAAGCTGTGTTCAGCTTATGGTTCTGTTCCTCGTTGCTTCTGGTTACCGTTCGGGGTTCTGTCACTGACCCCAATGAAGTTAACGCATTGAGAGCCATCAAAGGGCGTTTGACTGATATTAAAGGAAATCTGAACAACTGGAATGGCGGAGACCCATGTACATCTAACTGGAGAGGGGTTAATTGTCCCAGTAGTCCACAGGCTGATAACTATTTACATGTTCAAGAACTGCGACTACTAAATTTGAACTTGTTTGGAACTTTGGCACCAGAGATTGGAAATTTATCTTATATGGAAATATTGGACTTTATGTGGAACAATATTGGTGGGAGCATACCAAAGGAAATTGGCAACATCAAAAGTTTGAAACTCTTGCTTCTAAATGGAAACAACTTAACAGGTTGGCTGCCCGAAGAGCTTGGTTATCTTCCAAATCTGGATAGGATTCAAATTGATCAGAACAATATAACAGGACCTATTCCTACATCGTTTGCACAACTACACAGTACAAGGCACTTTCACATGAACAATAACTCACTTACTGGACCAATCCCTCGAGAGTTTTCCAGCTTGTCAAGCCTTGTTCACCTCCTTCTTGACCATAACAATTTATCAGGAGATCTTCCACACGAGCTCTCCCAGATGCCAAACATAAGCATAATCCAGCTTGATAACAACGATTTTGGCGGGGCTACCATTCCAGATTCATATGGCAACATTACAACATTGTTGAAGTTGAGCCTTAGGAACTGCAACTTGCAAGGAAAAATTCCTGATTTTAGCAGGATACCGAAACTTCTTTATCTTGACCTCAGTTCCAATCAATTGAATGAATCAATTCCTTCTAATAAGCTTTCTGAAAATGTCACAACCATTGATTTGTCAAACAACAAGCTAACTGGAAATATTCCATCCTACTTCTCTGCTCTCCCAAAGCTTCAACTATTGTCACTTTCAAACAATTCGTTGAACGGCAGTGTTCCTTCCGCCATTTGGCAGAACACGACTTCAAATGGAATGGAAAGATTGATCTTGGATTTTCAAAATAATGATCTTTTAGGCATAACAGGCACTATTGATCTCCGCCCTAACATCACACTCAGGCTTGCGGGAAATCCTCTTTGTTCCAATAACACTCTAGTTCATCTCTGTGGATCTACAAGCGACAATGACACGAACGGTTTGAGTCTGACGGACTCAACCGTTAACTGTCGCCCCCAAGAATGCCTTCCTCCTAATGAATATTCCAAAACATCTTCTGTAAAGTGTTTTTGTTCAGCGCCTTTGCTCATTGAATATCGACTGAAAAGTCCTGGGTTTCACGACTTTCATCCATTCCAGAAAAAATTTGAGTACTTCCTGGCATCCAGTTATACTTTAATGAATAACCAGGTTGATATTGGCACTCCTGAATGGGATGGACTTCGACTGAAAATGTACTTGAAGCTTTTTCCCGAACTCATTGATAACAAAGGCTCCCATACTTTCAATGAAAGCGAGGTTAAGCGACTTTATAGCATGTTCACAGGATGGGTTGTTTCAGATATAGAGCTTTTCGGACCTTATGAACTGCTCGACTTCCCTCTTGTGGGTCCTTACAATGATATGTTGTTTGGCCCCAGTAAAAGTTCAGGGATAGGCAAGGGAGCACTGGCTGGGATTATCTTAGGGACAATTGCCGGTGCAGTTACGTTATCTGCAATTGTGACTCTTCTTATCTTGAGGGGGCGGATGAGAGATTACCATGCACTTTCATCAAGCCGACTGTTGCCTAGAATATCCATAAAAATTGATGGTGTGAGGAGCTTCACTTTTGAAGAAATGGCCTTGGCTACTAACAATTTTAGTGACTCCAGTCAAGCTGGCCAAGGGGGCTATGGGAAAGTATATAGAGGTACTCTCACCGATGGCACTGTTGTAGCAATTAAACGTGCGCGGGCGGGATCACTGCAAGGCCGGAGGGAGTTCCTAACAGAAATACAGTTACTATCAAGGTGTCATCATCGAAACCTCGTGACTTTGGTTGGATACTGTGATGAAGGAGGTGAACAGATGCTGGTTTATGAATTTATGCCAAATCGCACGCTAAGGGATCATCTTTCTGCTGATTCGAAAGAACCTCTGAGTTTTGATACGAGATTGAGGATTGCACTAGGATCAGCCAAGGGCATCCTGTATCTACATACGGAAGCTGATCCTCCAATATTCCACCGAGATGTCAAGGCCAGCAACATATTATTGGACTCCAGGTTAAATGCAAAAGTTGCTGATTTTGGACTCTCACGGCTTGCTCCAGTTCCAGATACTGAAGGAATTGTACCTGGCCATGTATCTACAGTGGTAAAAGGAACCCCGGGCTACCTTGACCCAGAGTACTTTTTAACGCATAAGTTGACTGACAAGAGTGATGTTTATAGTTTTGGTGTTGTCCTTCTGGAACTTTTGACAGGAAAACCACCGATCTCACATGGCAAAAATCTTGTTAGAGAGGTTATTGTTGCATACCAGTCCGGTGAAGTATTCTCGTTTGTTGATGGACGCATGGGGCCCTATCCTTCTGAGCACATAGGGAAGTTCTTGGACCTGGCCCTCAAGTGTTGCAAAGAAGAGCCAGATGAACGACCTAAAATGGCAGAGGTGGTTCGGGAGCTTGAAAATATGTGGTCCATGATGCCGGAGTCCAATGCCAGGATACCTGAATATATATCCGGTGATTCTGGAAAATTATTCAGTAGTTCAACACCATCTTCGTCCTCTGTTGGCAAAACTCCTTTAATATCGGGAGACATGTCTGGTAGCGAACTTGTTAGTGGGGTAGAGCCAACCATCAGGCCAAGGTAG 2868 0.4296 MYLSKVWQYEAVFSLWFCSSLLLVTVRGSVTDPNEVNALRAIKGRLTDIKGNLNNWNGGDPCTSNWRGVNCPSSPQADNYLHVQELRLLNLNLFGTLAPEIGNLSYMEILDFMWNNIGGSIPKEIGNIKSLKLLLLNGNNLTGWLPEELGYLPNLDRIQIDQNNITGPIPTSFAQLHSTRHFHMNNNSLTGPIPREFSSLSSLVHLLLDHNNLSGDLPHELSQMPNISIIQLDNNDFGGATIPDSYGNITTLLKLSLRNCNLQGKIPDFSRIPKLLYLDLSSNQLNESIPSNKLSENVTTIDLSNNKLTGNIPSYFSALPKLQLLSLSNNSLNGSVPSAIWQNTTSNGMERLILDFQNNDLLGITGTIDLRPNITLRLAGNPLCSNNTLVHLCGSTSDNDTNGLSLTDSTVNCRPQECLPPNEYSKTSSVKCFCSAPLLIEYRLKSPGFHDFHPFQKKFEYFLASSYTLMNNQVDIGTPEWDGLRLKMYLKLFPELIDNKGSHTFNESEVKRLYSMFTGWVVSDIELFGPYELLDFPLVGPYNDMLFGPSKSSGIGKGALAGIILGTIAGAVTLSAIVTLLILRGRMRDYHALSSSRLLPRISIKIDGVRSFTFEEMALATNNFSDSSQAGQGGYGKVYRGTLTDGTVVAIKRARAGSLQGRREFLTEIQLLSRCHHRNLVTLVGYCDEGGEQMLVYEFMPNRTLRDHLSADSKEPLSFDTRLRIALGSAKGILYLHTEADPPIFHRDVKASNILLDSRLNAKVADFGLSRLAPVPDTEGIVPGHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSFGVVLLELLTGKPPISHGKNLVREVIVAYQSGEVFSFVDGRMGPYPSEHIGKFLDLALKCCKEEPDERPKMAEVVRELENMWSMMPESNARIPEYISGDSGKLFSSSTPSSSSVGKTPLISGDMSGSELVSGVEPTIRPR 955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01301 955 Gene3D Ribonuclease Inhibitor 295 383 IPR032675 -
Accr4g01301 955 PANTHER RECEPTOR-LIKE PROTEIN 55 46 897 - -
Accr4g01301 955 Pfam Protein tyrosine and serine/threonine kinase 629 893 IPR001245 GO:0004672|GO:0006468
Accr4g01301 955 ProSitePatterns Serine/Threonine protein kinases active-site signature. 744 756 IPR008271 GO:0004672|GO:0006468
Accr4g01301 955 Gene3D Phosphorylase Kinase; domain 1 599 699 - -
Accr4g01301 955 ProSiteProfiles Protein kinase domain profile. 624 898 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g01301 955 Gene3D Transferase(Phosphotransferase) domain 1 700 909 - -
Accr4g01301 955 SUPERFAMILY Protein kinase-like (PK-like) 609 913 IPR011009 -
Accr4g01301 955 SMART LRR_typ_2 272 297 IPR003591 -
Accr4g01301 955 SMART LRR_typ_2 128 152 IPR003591 -
Accr4g01301 955 SMART LRR_typ_2 319 343 IPR003591 -
Accr4g01301 955 SMART LRR_typ_2 200 224 IPR003591 -
Accr4g01301 955 Pfam Leucine rich repeat N-terminal domain 33 71 IPR013210 -
Accr4g01301 955 Gene3D Ribonuclease Inhibitor 32 192 IPR032675 -
Accr4g01301 955 Pfam Leucine rich repeat 297 342 IPR001611 GO:0005515
Accr4g01301 955 Pfam Leucine rich repeat 153 213 IPR001611 GO:0005515
Accr4g01301 955 MobiDBLite consensus disorder prediction 917 955 - -
Accr4g01301 955 MobiDBLite consensus disorder prediction 917 935 - -
Accr4g01301 955 SMART serkin_6 624 899 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g01301 955 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g06840 33 194 - -
Accr4g01301 955 Gene3D Ribonuclease Inhibitor 193 294 IPR032675 -
Accr4g01301 955 FunFam Leucine-rich repeat protein kinase family protein 590 699 - -
Accr4g01301 955 CDD STKc_IRAK 631 896 - -
Accr4g01301 955 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 700 909 - -
Accr4g01301 955 SUPERFAMILY L domain-like 46 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01301 Accr-Chr4 12730708 12741998 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01301 18 907 Receptor kinase-like Gene Family AT5G01950 55.630 0.0 931
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Accr4g01301 PK_Tyr_Ser-Thr 1.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01301 - - pcin:129318464 1424.07