Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01286 ATGGGGTCCGAGTTCTGTGTTGGTGTTTTTGGTGGGTCCGCCACTGCTCATGAATGGAAAAAGGGGTGGCCTCTTCCATATGGTGGATTTGCTCAATATTGTAACAGCTGCGGAATTTCAACTGAATGCAAGCTTGACACTCTTGATTCCATATCTGCCCATGAGGCATCCATTTTCTGTAGTAAATTCCACCGTGAAGAAACTGGTTGGAGGGATTGCGGCTTTTGCAACAAGCCTATCCACAGTGGATGCATAGTATCCAGTCATTTGTTTGATTACCTTGACTTTGGAGGTATAGGTTGCATCAGCTGTATAAAGGCTTCTCGATTGTGTTTGAACACTAAAGAACCTAATGAGGCTGTTACATCTATCACAACAAATACAAGTGATTGTCCCCCTCTTCATATTGATGGGAAACGGTTGGTGGATAGTGTTGATGAGGGAAAACTGATGCAGTTATGTAGAATCGTCGAAGCTAGTGGAACTAATGGTTTGCATCAGCCTTGGGGAGATAAAATAATTTCATCTAGTGGGTCAAAGAGCCAAGATATTAAGTGTCTAACTGGGGATATGGATTCTGGATTTTCAAATATGATTGCACAATCTATTCAGTCATTAAAATTTCCTTTATTAGAAAATAGTAGACCAACATGGGAGATTAAAAATATGTGTGAACCACTTGCACAACCATCTTTGAATATGTCCCTGGGAATTCCATCAGGAAACTCTGCCCCTTCTTCTACTGGCGAGATTGTAGAAGAAAGGCTTGAGGGCAAACCATCTTCTCTGTTTCATCAAGGGCAAAGATCTCATGCTGTATTTGCTAAACCATCAAAGACTGGTCTTTCCATGAACATAGAAACAAATAAAGGAATGAATTCTATTTCGAAGGCCTGTGTTGGCCGGCCACCTGTTGAAGGAAGGGGCAAGAGTCAGCTACTTCCTCGGTACTGGCCTAGGTATACTGATGATGAGTTGAAGCAATTGTCTGGAAATTTGAAATCCACTGTAGTGCCATTATTTGAGAAGGTGCTGAGTGCCAGTGATGCAAGTCGAACTGGGCGCCTTGTCCTTCCAAAAGCTTGTGCTGAAGCTTTTTTCCCTCCTATCTGTCAATCAGAAGGTCTTCCTTTGGAAATACAAGATGTGAAGGGGAATGAATGGACATTTCAGTTCAGATATTGGCCTAATAACAACAGCAGGATGTATGTCTTGGAGGGTGTGACCCCTTGCATACAGTCAATGCAATTGATTGCGGGTGATACTGTGACATTTAGTAGGATAGATCCTGGGGGCAGACTTATTATGGGTTTCAGAAAGACAGCAACTAGTCTGGAACCACAGGATGTGTCTACATCTGGACATTCTAATGGGATTACAGTAAGGGAAACAGCCATTTCTGGTGCAACTGAGAACCTGCCCTCAGGAAGTGGTTATTCTGATCTTCTTCAATCTATGGAAGAGAACAGGGAACCTCACTTAAATAGACAGACGGAGCACCTGCATTTGGGTATCAGGGTAGCTGATTTTACCCAAACGGAAAATTATGGCCAGACGACAAAAAATGATTCACCGCAGCTATCAGTTTCAGTTTCAGAGAAGAAAAGGACTCGGAATATTGGGCCTAAGAGTAAGAGGTTGCTCATTAATTGTGAAGATGCTTTGGAGTTGAGACTAACGTGGCAGGAAGCACAAGATTTACTTCGTCCACCACCCAGTGTTGAGCCTATCATTGTCACAATTGAGGATCACATTTTTGAGGAGTACAATGAACCCCCAGTTTTTGGGAAGAGAACTATATTCAGTGCCTGTCCATCTGGGGGACATAAACAATGGGCTTCATGTGATGATTGCACTAAATGGCGAAAATTGCCTATAGATGTTCTTTTACCACCTAAGTGGACTTGTTCTAAAAATGTCTGGGATCCAACCAGGTCTTCATGTTCTGCACCGGAGGAGCTAGGACCCAAGGAATTGGAAGATCTTTTGAAATCCAGCAAAGTGTTGGAAGATAGTCTCAGAGATCCTTGCGAGTCATCAGGCGAACCCACCACCAAACATCCTAGACATCGTGCCGGCTGCACCTGCATTGTCTGCATTCAGCCACCAAGTGGAAAGGGAAGACATCATTCCACCTGTACTTGCAACGTGTGCATGACTGTGAAAAGGCGTTTCAACACCCTTATGCTGCGTAAGAAGAAACGCCAATCCGATGCTAACCAGATGGATCACAGAGAAGAGTCTGGTATGAATGGAGCAACTAGGGAAGACACAAGTCATGCGGAAAAAGAAGGGAGCATAAAAAGAAGAAAGCTTGAGGCGGCCGAATCCAGTGCTGTGCAGATAGATCTGAATAGCCATCCTGATCGTGAAGACATGCAAGTTGATGCACCAAACATGAATGGTCATCTTGGAGCTCCAGACTATCCACTTCCTGTGTATATGGATCAAAACGGCCCTAATGGAGGTCAGGGGCACTTCTCTAATGGGGGAAGCCTTGGACCAGTTATCTGGGAGAAGGAAAGAACTGACGAAAAGTCATACGATGATCCCAATTCAAGTCAGAACAATCATCCTTGA 2580 0.4388 MGSEFCVGVFGGSATAHEWKKGWPLPYGGFAQYCNSCGISTECKLDTLDSISAHEASIFCSKFHREETGWRDCGFCNKPIHSGCIVSSHLFDYLDFGGIGCISCIKASRLCLNTKEPNEAVTSITTNTSDCPPLHIDGKRLVDSVDEGKLMQLCRIVEASGTNGLHQPWGDKIISSSGSKSQDIKCLTGDMDSGFSNMIAQSIQSLKFPLLENSRPTWEIKNMCEPLAQPSLNMSLGIPSGNSAPSSTGEIVEERLEGKPSSLFHQGQRSHAVFAKPSKTGLSMNIETNKGMNSISKACVGRPPVEGRGKSQLLPRYWPRYTDDELKQLSGNLKSTVVPLFEKVLSASDASRTGRLVLPKACAEAFFPPICQSEGLPLEIQDVKGNEWTFQFRYWPNNNSRMYVLEGVTPCIQSMQLIAGDTVTFSRIDPGGRLIMGFRKTATSLEPQDVSTSGHSNGITVRETAISGATENLPSGSGYSDLLQSMEENREPHLNRQTEHLHLGIRVADFTQTENYGQTTKNDSPQLSVSVSEKKRTRNIGPKSKRLLINCEDALELRLTWQEAQDLLRPPPSVEPIIVTIEDHIFEEYNEPPVFGKRTIFSACPSGGHKQWASCDDCTKWRKLPIDVLLPPKWTCSKNVWDPTRSSCSAPEELGPKELEDLLKSSKVLEDSLRDPCESSGEPTTKHPRHRAGCTCIVCIQPPSGKGRHHSTCTCNVCMTVKRRFNTLMLRKKKRQSDANQMDHREESGMNGATREDTSHAEKEGSIKRRKLEAAESSAVQIDLNSHPDREDMQVDAPNMNGHLGAPDYPLPVYMDQNGPNGGQGHFSNGGSLGPVIWEKERTDEKSYDDPNSSQNNHP 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01286 859 MobiDBLite consensus disorder prediction 516 535 - -
Accr4g01286 859 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 15 818 - -
Accr4g01286 859 SUPERFAMILY DNA-binding pseudobarrel domain 339 443 IPR015300 -
Accr4g01286 859 MobiDBLite consensus disorder prediction 816 859 - -
Accr4g01286 859 ProSiteProfiles B3 DNA-binding domain profile. 341 442 IPR003340 GO:0003677
Accr4g01286 859 SMART B3_2 341 441 IPR003340 GO:0003677
Accr4g01286 859 Pfam CW-type Zinc Finger 611 653 IPR011124 GO:0008270
Accr4g01286 859 MobiDBLite consensus disorder prediction 731 780 - -
Accr4g01286 859 ProSiteProfiles Zinc finger CW-type profile. 606 656 IPR011124 GO:0008270
Accr4g01286 859 CDD B3_DNA 339 440 IPR003340 GO:0003677
Accr4g01286 859 MobiDBLite consensus disorder prediction 516 536 - -
Accr4g01286 859 Gene3D - 609 664 - -
Accr4g01286 859 MobiDBLite consensus disorder prediction 731 776 - -
Accr4g01286 859 Pfam B3 DNA binding domain 341 439 IPR003340 GO:0003677
Accr4g01286 859 Gene3D - 319 445 IPR015300 -
Accr4g01286 859 FunFam B3 domain-containing transcription repressor VAL1 319 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01286 Accr-Chr4 12488818 12496257 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01286 1 797 B3 DNA Binding Superfamily AT2G30470 44.952 0.0 627
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Accr4g01286 B3 6.9e-15 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01286 K09287 - gmx:100789848 1049.65