Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01285 ATGGGGTCCGAGTTCTGTGTTGGTGTTTTTGGTGGGTCCGCCACTGCTCATGAATGGAAAAAGGGGTGGCCTCTTCCATATGGTGGATTTGCTCAATATTGTAACAGCTGCGGAATTTCAACTGAATGCAAGCTTGACACTCTTGATTCCATATCTGCCCATGAGGCATCCATTTTCTGTAGTAAATTCCACCGTGAAGAAACTGGTTGGAGGGATTGCGGCTTTTGCAACAAGAACACTAAAGAACCTAATGAGGCTGTTACATCTATCACAACAAATACAAGTGATTGTCCCCCTCTTCATATTGATGGGAAACGGTTGGTGGATAGTGTTGATGAGGGAAAACTGATGCAGTTATGTAGAATCGTCGAAGCTAGTGGAACTAATGGTTTGCATCAGCCTTGGGGAGATAAAATAATTTCATCTAGTGGGTCAAAGAGCCAAGATATTAAGTGTCTAACTGGGGATATGGATTCTGGATTTTCAAATATGATTGCACAATCTATTCAGTCATTAAAATTTCCTTTATTAGAAAATAGTAGACCAACATGGGAGATTAAAAATATGTGTGAACCACTTGCACAACCATCTTTGAATATGTCCCTGGGAATTCCATCAGGAAACTCTGCCCCTTCTTCTACTGGCGAGATTGTAGAAGAAAGGCTTGAGGGCAAACCATCTTCTCTGTTTCATCAAGGGCAAAGATCTCATGCTGTATTTGCTAAACCATCAAAGACTGGTCTTTCCATGAACATAGAAACAAATAAAGGAATGAATTCTATTTCGAAGGCCTGTGTTGGCCGGCCACCTGTTGAAGGAAGGGGCAAGAGTCAGCTACTTCCTCGGTACTGGCCTAGGTATACTGATGATGAGTTGAAGCAATTGTCTGGAAATTTGAAATCCACTGTAGTGCCATTATTTGAGAAGGTGCTGAGTGCCAGTGATGCAAGTCGAACTGGGCGCCTTGTCCTTCCAAAAGCTTGTGCTGAAGCTTTTTTCCCTCCTATCTGTCAATCAGAAGGTCTTCCTTTGGAAATACAAGATGTGAAGGGGAATGAATGGACATTTCAGTTCAGATATTGGCCTAATAACAACAGCAGGATGTATGTCTTGGAGGGTGTGACCCCTTGCATACAGTCAATGCAATTGATTGCGGGTGATACTGTGACATTTAGTAGGATAGATCCTGGGGGCAGACTTATTATGGGTTTCAGAAAGACAGCAACTAGTCTGGAACCACAGGATGTGTCTACATCTGGACATTCTAATGGGATTACAGTAAGGGAAACAGCCATTTCTGGTGCAACTGAGAACCTGCCCTCAGGAAGTGGTTATTCTGATCTTCTTCAATCTATGGAAGAGAACAGGGAACCTCACTTAAATAGACAGACGGAGCACCTGCATTTGGGTATCAGGGTAGCTGATTTTACCCAAACGGAAAATTATGGCCAGACGACAAAAAATGATTCACCGCAGCTATCAGTTTCAGTTTCAGAGAAGAAAAGGACTCGGAATATTGGGCCTAAGAGTAAGAGGTTGCTCATTAATTGTGAAGATGCTTTGGAGTTGAGACTAACGTGGCAGGAAGCACAAGATTTACTTCGTCCACCACCCAGTGTTGAGCCTATCATTGTCACAATTGAGGATCACATTTTTGAGGAGTACAATGAACCCCCAGTTTTTGGGAAGAGAACTATATTCAGTGCCTGTCCATCTGGGGGACATAAACAATGGGCTTCATGTGATGATTGCACTAAATGGCGAAAATTGCCTATAGATGTTCTTTTACCACCTAAGTGGACTTGTTCTAAAAATGTCTGGGATCCAACCAGGTCTTCATGTTCTGCACCGGAGGAGCTAGGACCCAAGGAATTGGAAGATCTTTTGAAATCCAGCAAAGTGTTGGAAGATAGTCTCAGAGATCCTTGCGAGTCATCAGGCGAACCCACCACCAAACATCCTAGACATCGTGCCGGCTGCACCTGCATTGTCTGCATTCAGCCACCAAGTGGAAAGGGAAGACATCATTCCACCTGTACTTGCAACGTGTGCATGACTGTGAAAAGGCGTTTCAACACCCTTATGCTGCGTAAGAAGAAACGCCAATCCGATGCTAACCAGATGGATCACAGAGAAGAGTCTGGTATGAATGGAGCAACTAGGGAAGACACAAGTCATGCGGAAAAAGAAGGGAGCATAAAAAGAAGAAAGCTTGAGGCGGCCGAATCCAGTGCTGTGCAGATAGATCTGAATAGCCATCCTGATCGTGAAGACATGCAAGTTGATGCACCAAACATGAATGGTCATCTTGGAGCTCCAGACTATCCACTTCCTGTGTATATGGATCAAAACGGCCCTAATGGAGGTCAGGGGCACTTCTCTAATGGGGGAAGCCTTGGACCAGTTATCTGGGAGAAGGAAAGAACTGACGAAAAGTCATACGATGATCCCAATTCAAGTCAGAACAATCATCCTTGA 2478 0.4399 MGSEFCVGVFGGSATAHEWKKGWPLPYGGFAQYCNSCGISTECKLDTLDSISAHEASIFCSKFHREETGWRDCGFCNKNTKEPNEAVTSITTNTSDCPPLHIDGKRLVDSVDEGKLMQLCRIVEASGTNGLHQPWGDKIISSSGSKSQDIKCLTGDMDSGFSNMIAQSIQSLKFPLLENSRPTWEIKNMCEPLAQPSLNMSLGIPSGNSAPSSTGEIVEERLEGKPSSLFHQGQRSHAVFAKPSKTGLSMNIETNKGMNSISKACVGRPPVEGRGKSQLLPRYWPRYTDDELKQLSGNLKSTVVPLFEKVLSASDASRTGRLVLPKACAEAFFPPICQSEGLPLEIQDVKGNEWTFQFRYWPNNNSRMYVLEGVTPCIQSMQLIAGDTVTFSRIDPGGRLIMGFRKTATSLEPQDVSTSGHSNGITVRETAISGATENLPSGSGYSDLLQSMEENREPHLNRQTEHLHLGIRVADFTQTENYGQTTKNDSPQLSVSVSEKKRTRNIGPKSKRLLINCEDALELRLTWQEAQDLLRPPPSVEPIIVTIEDHIFEEYNEPPVFGKRTIFSACPSGGHKQWASCDDCTKWRKLPIDVLLPPKWTCSKNVWDPTRSSCSAPEELGPKELEDLLKSSKVLEDSLRDPCESSGEPTTKHPRHRAGCTCIVCIQPPSGKGRHHSTCTCNVCMTVKRRFNTLMLRKKKRQSDANQMDHREESGMNGATREDTSHAEKEGSIKRRKLEAAESSAVQIDLNSHPDREDMQVDAPNMNGHLGAPDYPLPVYMDQNGPNGGQGHFSNGGSLGPVIWEKERTDEKSYDDPNSSQNNHP 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01285 825 ProSiteProfiles Zinc finger CW-type profile. 572 622 IPR011124 GO:0008270
Accr4g01285 825 Pfam CW-type Zinc Finger 577 619 IPR011124 GO:0008270
Accr4g01285 825 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 14 784 - -
Accr4g01285 825 MobiDBLite consensus disorder prediction 482 502 - -
Accr4g01285 825 Gene3D - 575 630 - -
Accr4g01285 825 Gene3D - 285 411 IPR015300 -
Accr4g01285 825 ProSiteProfiles B3 DNA-binding domain profile. 307 408 IPR003340 GO:0003677
Accr4g01285 825 SMART B3_2 307 407 IPR003340 GO:0003677
Accr4g01285 825 MobiDBLite consensus disorder prediction 697 742 - -
Accr4g01285 825 MobiDBLite consensus disorder prediction 482 501 - -
Accr4g01285 825 Pfam B3 DNA binding domain 307 405 IPR003340 GO:0003677
Accr4g01285 825 FunFam B3 domain-containing transcription repressor VAL1 285 412 - -
Accr4g01285 825 MobiDBLite consensus disorder prediction 782 825 - -
Accr4g01285 825 CDD B3_DNA 305 406 IPR003340 GO:0003677
Accr4g01285 825 MobiDBLite consensus disorder prediction 697 746 - -
Accr4g01285 825 SUPERFAMILY DNA-binding pseudobarrel domain 305 409 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01285 Accr-Chr4 12488818 12496257 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01285 8 791 B3 DNA Binding Superfamily AT4G32010 41.425 0.0 554
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Accr4g01285 B3 6.6e-15 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01285 K09287 - gmx:100789848 983.786