Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01259 ATGCCAGAGATCGAATGCGTGCCTGAGAACAACAACGCCTTGTTCGGAAAATATGAGCTCGGAAGGATTTTGGGCTGTGGGGCCTTCGCGAAAGTCTATTTTGCCCGCAATGTCCAGAACGGCCAGAGCGTGGCCATTAAGGTCATCAACAAGAAGAAGATATGTGGCACCGGCCTCATGTCTAATACCAAGCGTGAAATTACCATCATGAGTCGCCTCAATCACCCCAATATTGTCAAGCTCCACGAGGTCTTAGCCACCAAGACAAAGATCTATTTCGTCATGGAGTTCGTTAGGGGCGGCGAATTGTTTGCTAAGATCTCCAAGGGACGCTTCAGCGAGGATCTCAGCCGGAAGTATTTCCAACAGTTGATATCCGCCGTCGGCTACTGCCATTCCCGCGGCGTGTTCCACCGTGACTTGAAACCCGAGAACATCTTGCTCGACGAGGATGGGAATCTGAAGGTTTCGGACTTCGGACTCAGTGCTGTAAAAGATCAGATCCGACCCGATGGGTTGCTCCATACACTTTGTGGCACGCCGGCTTACGTCGCACCGGAGGTTTTGGCCAGGCAAGGCTACGATGGAGCGAAGGTCGATGTGTGGTCCTGTGGCATTATCCTCTTCGTATTGACAGCTGGATACCTTCCGTTCAACGACCCGAACCTCATTGCCATGTACAAGAAGATATACAAAGGCGAATATCGGTGTCCCCGTTGGATGTCACCCGACCTCCGGCGTTTTCTATCCCGGCTCCTGGACACCAACCCGGAGACCCGAATCACCATCGACGAGATCCTCCGGGACCCGTGGTTCAGGAAAGGGTACAAGGAGGTTAAATTTCACGAGGAACACGTTGGGTCTTCATCAGGGACGAAGTCCGATGAGGCGGAGAAGATGACTGATCTGAATGCATTTGATATCATCTCCTTCTCCACCGGTTTGAACCTGTCTGGTTTGTTTGATGACCCGCACAACAAAACAGAGGAAACCGAGCGGTTCGTGTTGGCAGCATCACCGGAGAAGCTAATGGAGAGATTGGAGGAGATCGCCAAGGTGGAGAAACTCGTCGTGAGGAGGAAGAAGGAATGTGGAGTGGAGCTGGAGGGGCTTAATGGTAGTTTTGGGGTTACAGTTGTTGTTTACCGGTTAATGGAAAGCCTCGTGTTAGTGGAGGCCCAAGGAAGAGGCAGAGACGGTATCAACTTCTGGAACAACAAGTTTAAACCTCAGCTCTGTGCTATTGTAGGTCAAGAAACAGATTCCCAGGTTGCCGGTGACTAA 1284 0.514 MPEIECVPENNNALFGKYELGRILGCGAFAKVYFARNVQNGQSVAIKVINKKKICGTGLMSNTKREITIMSRLNHPNIVKLHEVLATKTKIYFVMEFVRGGELFAKISKGRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENILLDEDGNLKVSDFGLSAVKDQIRPDGLLHTLCGTPAYVAPEVLARQGYDGAKVDVWSCGIILFVLTAGYLPFNDPNLIAMYKKIYKGEYRCPRWMSPDLRRFLSRLLDTNPETRITIDEILRDPWFRKGYKEVKFHEEHVGSSSGTKSDEAEKMTDLNAFDIISFSTGLNLSGLFDDPHNKTEETERFVLAASPEKLMERLEEIAKVEKLVVRRKKECGVELEGLNGSFGVTVVVYRLMESLVLVEAQGRGRDGINFWNNKFKPQLCAIVGQETDSQVAGD 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01259 427 Pfam NAF domain 302 359 IPR004041 GO:0007165
Accr4g01259 427 FunFam Non-specific serine/threonine protein kinase 8 302 - -
Accr4g01259 427 ProSiteProfiles NAF domain profile. 298 322 IPR018451 GO:0007165
Accr4g01259 427 ProSiteProfiles Protein kinase domain profile. 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g01259 427 ProSitePatterns Protein kinases ATP-binding region signature. 24 47 IPR017441 GO:0005524
Accr4g01259 427 FunFam Non-specific serine/threonine protein kinase 9 97 - -
Accr4g01259 427 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Accr4g01259 427 Gene3D Transferase(Phosphotransferase) domain 1 98 279 - -
Accr4g01259 427 Gene3D Kinase associated domain 1, KA1 299 417 - -
Accr4g01259 427 SUPERFAMILY Protein kinase-like (PK-like) 15 284 IPR011009 -
Accr4g01259 427 CDD CIPK_C 304 413 - -
Accr4g01259 427 Gene3D Phosphorylase Kinase; domain 1 7 97 - -
Accr4g01259 427 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 10 393 - -
Accr4g01259 427 SMART serkin_6 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g01259 427 Pfam Protein kinase domain 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01259 Accr-Chr4 12112911 12114194 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01259 1 425 CBL-interacting serine-threonine protein kinases AT2G30360 64.908 0.0 574
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Accr4g01259 Pkinase 2.6e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01259 - - tcc:18591074 636.721