LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Accr4g01256	ATGGAGAACAGATCAAGTGTCTTAATGGGAAGATATGAATTAGGAAGATTGCTGGGTCAAGGCACCTTTGCAAAAGTGTACTATGCACGAAGCACATTAACTAATCAGAGTGTGGCTGTTAAGTTAATTGATAAAGACAAGGTTATGAAATCTGGGCAAGCTGAGCACATCAAGCGTGAAATATCCATCATGAGGAAGGTTAGACATCCCTATATTATACAGCTCTTCGAGGTTATGGCCACCAAGAGTAAGATTTACTTTGTTATTGAATATGCTAAAGGTGGTGAACTCTTCACCAAGTTATCTAAAAAGGGAAAGCTCAAAGAGGAGGTTGCACATAAATATTTCTGGCAGCTGATCAATGCAGTTGAGTTTTGTCACAGCAGAGGCGTGTACCACCGAGATATTAAACCAGAGAACCTTTTGTTGGATGAAAATGGGAATTTGAAGGTTTCTGATTTTGGGTTAAGTGCTCTGGCGGAATCCAAGCGGGAAGATGGCCTGCTGCATACTACTTGTGGCACACCTGCCTATGTTGCTCCTGAAGTCATCAAAAGGAGAGGGTATGATGGTGCCAAAGCTGATGTCTGGTCTTGTGGGGTAGTATTGTTTGTATTATTGGCAGGTTATCTCCCTTTTCATGATCCAAATTTGATTGAGATGTATAGGAAGATTGACAAAGCAGAATTTGAATTTCCTATTTGGTTCTCACCAGAAGTTCACACTCTTTTAAGCCGGATGTTAGATCCAGATCCTAATACTAGGATTTCCATGGAAAAGATTAGGGAGTGTTCTTGGTTTAAGAAAGGACCAAGTTCTAAACATAAAAAAATTGTAGTGCAAAAGAAGGCTGTTTCTTCATTGGGTGAAAATCCTTCCAATCAAAGCGGCGAAGCAGAAGCAAAGCAGGAGTCAGTTGTACCAACTAGTATAAATGCATTTGATATCATATCCCTTTCTGCTGGATTTGATCTTTCTGTATTCTTTGAAGACAGTTTTAAGAAGAGAGAAGCAAGATTTACCTCAAGACAACCTGCATCGGCTATCATCTCGAAGCTGGAAGAGACTGCCAAGCGTCTGAAGATGAAAATAAAGAAGAAAGCTGCAGGTTTGTTGAAGCTACAGGGCCTCAGGGAAGGCAGAAAGGGTATTTTGTCCATCGATGCAGAGATATTTGAGGTTGCTCCGTATTTCCATCTGGTGGAGGTGAAAAAATCAGATGGAGATACATTGGAATTTCAGAAAATACTGAAAGAAGGTATAAGGCCTGCTCTTCAGGATATTGTCTGGGTTTGGCAAAGCGATGACCAAGAACAGCAATCAGAGCATCAACCGCAGATACATGACCCGCAGCCACAAGAATCACAGCATTAA	1374	0.4105	MENRSSVLMGRYELGRLLGQGTFAKVYYARSTLTNQSVAVKLIDKDKVMKSGQAEHIKREISIMRKVRHPYIIQLFEVMATKSKIYFVIEYAKGGELFTKLSKKGKLKEEVAHKYFWQLINAVEFCHSRGVYHRDIKPENLLLDENGNLKVSDFGLSALAESKREDGLLHTTCGTPAYVAPEVIKRRGYDGAKADVWSCGVVLFVLLAGYLPFHDPNLIEMYRKIDKAEFEFPIWFSPEVHTLLSRMLDPDPNTRISMEKIRECSWFKKGPSSKHKKIVVQKKAVSSLGENPSNQSGEAEAKQESVVPTSINAFDIISLSAGFDLSVFFEDSFKKREARFTSRQPASAIISKLEETAKRLKMKIKKKAAGLLKLQGLREGRKGILSIDAEIFEVAPYFHLVEVKKSDGDTLEFQKILKEGIRPALQDIVWVWQSDDQEQQSEHQPQIHDPQPQESQH	457

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Accr4g01256	457	SMART	serkin_6	12	267	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Accr4g01256	457	FunFam	Non-specific serine/threonine protein kinase	306	430	-	-
	Accr4g01256	457	ProSitePatterns	Protein kinases ATP-binding region signature.	18	41	IPR017441	GO:0005524
	Accr4g01256	457	ProSiteProfiles	Protein kinase domain profile.	12	267	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Accr4g01256	457	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	131	143	IPR008271	GO:0004672\|GO:0006468
	Accr4g01256	457	CDD	CIPK_C	312	426	-	-
	Accr4g01256	457	Gene3D	Phosphorylase Kinase; domain 1	3	91	-	-
	Accr4g01256	457	ProSiteProfiles	NAF domain profile.	306	330	IPR018451	GO:0007165
	Accr4g01256	457	Pfam	Protein kinase domain	12	267	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Accr4g01256	457	CDD	STKc_SnRK3	11	266	-	-
	Accr4g01256	457	MobiDBLite	consensus disorder prediction	436	457	-	-
	Accr4g01256	457	Gene3D	Kinase associated domain 1, KA1	306	431	-	-
	Accr4g01256	457	SUPERFAMILY	Protein kinase-like (PK-like)	8	312	IPR011009	-
	Accr4g01256	457	Gene3D	Transferase(Phosphotransferase) domain 1	92	291	-	-
	Accr4g01256	457	Pfam	NAF domain	308	366	IPR004041	GO:0007165
	Accr4g01256	457	FunFam	Non-specific serine/threonine protein kinase	2	295	-	-
	Accr4g01256	457	FunFam	Non-specific serine/threonine protein kinase	3	91	-	-
	Accr4g01256	457	PANTHER	CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED	5	423	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Accr4g01256	Accr-Chr4	12083393	12084766	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Accr4g01256	1	441	CBL-interacting serine-threonine protein kinases	AT5G58380	65.502	0.0	624

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CAMK_CAMKL-CHK1	Accr4g01256		Pkinase	1.6e-76	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Accr4g01256	-		K07198	gmx:100779316	639.417