Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01254 ATGCTTGGATGTCCAGAAACAGAAAGGGCAGAAGAGATAGCGAAGAACACAGGAGAGGCGGTATCATCAGAAGCGGCTAGCCAAATGGGAAGGAGAAATTTCCATGGACCAGCAGCTTCAGGGACAACCTTAAACACTGTAACTCCTTGTGCTGCATGTAAGCTTCTGAGAAGAAGATGTGCAGAGGAATGCCCTTTCTCTCCTTACTTTTCACCCCATGACCCTCAGAAGTTTGCTGCTGTTCATAAAGTGTTTGGTGCCAGCAATGTCTCCAAGATGCTAATGGAGGTGGCCGAGAGCCAAAGAGCAGATGCTGCAAACAGTCTGGTTTATGAAGCAAACCTGAGGCTGAGGGACCCAGTTTATGGATGCATGGGTGCAATATCAACTTTGCAACAACAAGTTCAGACATTACAGGCAGAGCTAAATGCTGTGAGAGGTGAGATTCTCAAGTATAAGTATAGAGAAGCTGCTAGTCAGATCATTTCTTCTCATAATCATCATGGTGGGGCTTTGGTTTCTTCTGTGGAGGAACCTCAACCACCTCCTCAACCTCCAAAACCACCTTCATTGACTTCTTCTGCTTCTGTTGTTCTTTCATCCTTGTCTTCATCTTCCAGTTCTTCTGTATACACTCCCCCTAATAGCACAATTAGCCATGGATCTATCTCCAGCGAAAATATTCCTTACTTTGTTTGA 699 0.4506 MLGCPETERAEEIAKNTGEAVSSEAASQMGRRNFHGPAASGTTLNTVTPCAACKLLRRRCAEECPFSPYFSPHDPQKFAAVHKVFGASNVSKMLMEVAESQRADAANSLVYEANLRLRDPVYGCMGAISTLQQQVQTLQAELNAVRGEILKYKYREAASQIISSHNHHGGALVSSVEEPQPPPQPPKPPSLTSSASVVLSSLSSSSSSSVYTPPNSTISHGSISSENIPYFV 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01254 232 MobiDBLite consensus disorder prediction 191 224 - -
Accr4g01254 232 ProSiteProfiles LOB domain profile. 48 149 IPR004883 -
Accr4g01254 232 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 45 187 - -
Accr4g01254 232 Pfam Lateral organ boundaries (LOB) domain 49 145 IPR004883 -
Accr4g01254 232 Coils Coil 128 148 - -
Accr4g01254 232 MobiDBLite consensus disorder prediction 13 40 - -
Accr4g01254 232 MobiDBLite consensus disorder prediction 168 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01254 Accr-Chr4 12050902 12051898 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01254 8 159 AS2 family AT2G30340 69.737 2.00e-73 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Accr4g01254 LOB 2.1e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01254 - - gmx:100813489 284.263