Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01240 ATGGCTTCAACTGCTTTTCAATGGCTAAGTCTTGTAGGCATCATTTGGCTCCAAGCCATAAACGGAACAAACACTAATTTCCCTGCTTACTCATCTCAACTGAAGCAGCTTCTTTCAATTTCACAAGTTCAGCTCAACAACCTTGCTTTTGCCTCTGATGCAGGAAAAATCCTTGGCTGGTTCTCTGGCATGGCTTCTGTTCACCTTCCTCTCTGGCTTGTTCTTGTGATCGGTTCAAGTCTTGGGTTGGTTGGTTATGGAGTCCAATATCTCTTCATCACAAACCAAATCTCTTCTCTGTCCTACTGGCATGTCTTCTTACTAACCGTTCTTGCTGGAAACAGCATTTGTTGGATTAACACTGTCTGTTATGTCATCGCTATCAGGAACTTCCCATCTGATCACCAGGTCGCTGTGGGGTTAACAACTAGTTATCAAGGGCTAAGTGCAAAGATCTATACTAATATTGTCCAAGTTCTTTCTCCCCGCAAAAAAGCTAGATACTTTCTTTTCTTGAACTCCGTCTTACCTCTGTTAGTGAGCCTCATGGCAACTCCTTTAACTAGGGAAATTGAAGTCACGAGGCCTAAGCGAATGCGTGTTGGATTTGTTGTAATGTTTGTTATTACAATTTCCACTGGCGTATATGCTGTTCTAAGCAGCTTGCAATTTTTGTCTCGCAATTTATCTCCATTGGGTAATCTGATTGGTATTCTAGCGTCCCTTCTTCTCCCTCTACTGCTTCCAGTATCAGAGAAGATCAACGAATTGGTGAGATCATGGCAAGCCAATCGTGAAAGGCTAAGAATTTATCATTTTACTCTGGAGGAAAATAACAGTCCTATTCAAGAGAGGACAGAGCCAAAAGATGGAGAGGAGGAACAAGAAGAAGATAGCAACAGCGAGGTTCAAGTTCAAGAAGTTGCTGTCAGAGAAGAAATTGGAGTGAAGTTAATGCTGAGAAGAATAGATTTCTGGTTATATTTTTTAATATATTTATTCGGTGCAACACTTGGTTTAGTCTTTATGAACAACCTGGGGCAAATTGCAGAGTCCAGAGGCTACTCCAACACTTCATCTCTGGTATCATTGTCTTCATCCTTTGTGTTCTTCGGCCGTCTCATGCCATCTCTCATGGACTACTTCTCCAGGGGCAAGGTCAGGATTTCAAGGCCAGCTAGCATGGCGGCCTTAATGGCGCCAACAGCAGGATCATTCTTGTTGCTTCTAAACAGAACAGAGCTAGCTCTGTACATGAGCACTGCCATAATAGGAGTGTGCACTGGAGCTATCACTTCACTTTCTGTGTCCACAACCACGGAACTATTCGGGACTAAGAATTTCTCAGTGAACCACAACATTGTTGTGACCAACATTCCCATTGGTTCTTTTGTGTTTGGTTACTTGGCTGCTCAGATTTATCACAAGGAACAAGGTGAAGATGGGAAATGCATAGGCATGGAGTGTTATAGAACTACTTTCATTATCTGGGCTTCGCTTTGTTTCTTTGGGACCTTGTTGGCCTTGATTCTGCATGCTAGAACTCGTAAGTTTTATTCGCAGAGAGACAATTGA 1575 0.426 MASTAFQWLSLVGIIWLQAINGTNTNFPAYSSQLKQLLSISQVQLNNLAFASDAGKILGWFSGMASVHLPLWLVLVIGSSLGLVGYGVQYLFITNQISSLSYWHVFLLTVLAGNSICWINTVCYVIAIRNFPSDHQVAVGLTTSYQGLSAKIYTNIVQVLSPRKKARYFLFLNSVLPLLVSLMATPLTREIEVTRPKRMRVGFVVMFVITISTGVYAVLSSLQFLSRNLSPLGNLIGILASLLLPLLLPVSEKINELVRSWQANRERLRIYHFTLEENNSPIQERTEPKDGEEEQEEDSNSEVQVQEVAVREEIGVKLMLRRIDFWLYFLIYLFGATLGLVFMNNLGQIAESRGYSNTSSLVSLSSSFVFFGRLMPSLMDYFSRGKVRISRPASMAALMAPTAGSFLLLLNRTELALYMSTAIIGVCTGAITSLSVSTTTELFGTKNFSVNHNIVVTNIPIGSFVFGYLAAQIYHKEQGEDGKCIGMECYRTTFIIWASLCFFGTLLALILHARTRKFYSQRDN 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01240 524 Gene3D MFS general substrate transporter like domains 270 516 IPR036259 -
Accr4g01240 524 CDD MFS_Mch1p_like 7 505 - -
Accr4g01240 524 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 520 - -
Accr4g01240 524 MobiDBLite consensus disorder prediction 281 304 - -
Accr4g01240 524 Pfam Nodulin-like 7 249 IPR010658 -
Accr4g01240 524 SUPERFAMILY MFS general substrate transporter 5 517 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01240 Accr-Chr4 11949499 11951295 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01240 1 522 Nodulin-like Gene Family AT2G30300 48.968 1.70e-159 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01240 - - gmx:100808034 725.317
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr4g01240 4 11949499 11951295 Accr3g02039 3 31660626 31663082 CCT
Accr4g01240 4 11949499 11951295 Accr4g01240 4 11949499 11951295 ECH