Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01206 ATGGAATACAATTCAGTGCTCCGAAGCCCAAAGAAAGAGGAGCAGCAAGTTCCCGACGCTACAACTTATTCCAGCGAAGATTTCAATATCTTGGATGAACTGGGCGACGGCGTATTAGGCTCTGAACACGACCACTCAAAATCACAACATCACTGTCATGGTGGTTACCTTAATTGGGACTTCATGGAAATGGAAGGTTTCTCAACTGTTGATGCAGAGGAAGCAGAAGTAGCAAACGACGATGAAGGCGAAGAACAGGAGGAGGAGGAGGAGAGAAGCAAATGCCGCCTTGTGGAAAAGGACAAGATTATAAAGACAGAAAAAAACGGTGGAGGACTCTGGGAGGAAGACGATGATGATGAGAAGATGGCGTCTTTGAAATTGAATTTGAACCATCAAGAGGTTTTGGACGCATGGTCTGACCGTGGCTCTCTCTGGGCTCACGATTCTTCTCTTTCAATGCCTTCCAACGCTAATGATGCATTCTTCTATATGGGAGAAGTTCCAATACTGCAGGAGGAAGATAGAAGCAGAAGGAATGCGAGTGTTAGGAGGTACAAAGAGAAGCGTCAGAGCAGACTTTTCTCCAAGAAGATAAGATACGAAGTCCGAAAACTCAATGCTGATAAAAGACCTCGACTCAAGGGTCGTTTTGTGAAGAAGAGACTTTAA 672 0.4494 MEYNSVLRSPKKEEQQVPDATTYSSEDFNILDELGDGVLGSEHDHSKSQHHCHGGYLNWDFMEMEGFSTVDAEEAEVANDDEGEEQEEEEERSKCRLVEKDKIIKTEKNGGGLWEEDDDDEKMASLKLNLNHQEVLDAWSDRGSLWAHDSSLSMPSNANDAFFYMGEVPILQEEDRSRRNASVRRYKEKRQSRLFSKKIRYEVRKLNADKRPRLKGRFVKKRL 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01206 223 Coils Coil 72 92 - -
Accr4g01206 223 MobiDBLite consensus disorder prediction 1 26 - -
Accr4g01206 223 Pfam CCT motif 179 221 IPR010402 GO:0005515
Accr4g01206 223 MobiDBLite consensus disorder prediction 1 15 - -
Accr4g01206 223 ProSiteProfiles CCT domain profile. 179 221 IPR010402 GO:0005515
Accr4g01206 223 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 54 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01206 Accr-Chr4 11548456 11549396 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01206 115 221 C2C2-CO-like Transcription Factor Family AT1G73870 41.803 1.59e-19 84.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Accr4g01206 CCT 6e-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01206 - - gmx:100801038 224.172