Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01175 ATGTCTTCCCTTCTTCTTCTTCTTGCTCCTCTTCTCTTTCACCTTCTCCTTCTCTCCACCATACCATCTCTCACCGAAGCCGGCAGCGGACAATGGCAGCTCCTACAGAACAGCATTGGCATTACGGCCATGCACATGCAGTTACTTCACCACGACCGTGTCGTCATCTTCGACCGCACCGACTTTGGCCTCTCTAACTTAACCTTGCCCAATGGCAGATGCCGCCAAAACCCCAAAGAACTGGTCGTCAAAACAGACTGCACAGCTCATGCCCTCGAGTACGACGTCGTTTCCAACTCTTTCCGCCCACTCTTTGTCCACACCAACGTCTGGTGTTCCTCCGGCTCTGTCTCCCCCGACGGCCGCCTCATCCAGACCGGCGGCTTCAACGATGGAGACCGTACCGTCAGGATGATTAGCCCTTGCCCTGACTGTGACTGGGAAGAAGTAGGCGGCGGATTGGCAGAGCGACGGTGGTACTCCACCAATCACATTCTTCCAGATGGACGTCAGATGATAATTGGCGGGAGAAGAACATTCAACTACGAGTTTTATCCTAAAGCAGACGCAAAAAACAGTTACAGTCTACCGTTTCTGGTACAGACCAATGATGCGGGTACAGAGAACAACTTGTACCCCTTTGTTTTTCTAAACGTGGACGGCAACATGTTCATTTTCGCCAACAATCGAGCAATCTTACTGGATTTCGACAGGAACAAGGTGGTCAGGAGCTACCCACAAATACCAGGTGGAGATCCCAGATCATATCCTAGTACAGGCTCGGCGGTGTTATTACCTTTGAAGAATTTACAGGCTAAGACCGTTGAAGCAGAGGTTTTGATTTGTGGCGGAGCCCCGAGAGGCTCGTATGAGCAGGCCATCAAAGGCAAATTTCTCCCAGCTTTGAATACATGTGCTCGGATCAAGATCACTGACCCGAACCCAGAATGGGTCATGGAGACAATGCCCGGATCTAGAGTTATGAATGACATGGTTTTGCTGCCTAACGGTAATGTTTTGATCATCAATGGAGCAGCTTCGGGGACGGCGGGTTGGGAAGCGGGTCGAAACCCGGTGTTGAATCCGTTTCTGTATAAAACCAACAGCCCGGTTGGGTCTCGGTTAGAATTGCAAAACCCGAGTAATATTCCCCGGATGTACCACTCCACGGCGGTTCTTCTTCGTGACGGACGCGTGCTTGTCGCCGGAAGCAATCCTCACGTATATTACAATTTCACCAACGTCTTATTCCCAACGGAGTTTAGATTGGAGGCGTTTTCGCCATCGTATTTGGAGCCTGGATTCTCTAACGTGCGTCCTACAATCGTGTCTCCTCCTTCTCAAGCTAAACTCAAGTATGGTCAGAAGTTGAAGCTAAGGTTCCAGGTGACAACAACGCTAGTTCAGAATATGGTGACGGTGACGATGTTGTTGCCGCCATTCAATACGCACTCGTTCTCGATGAATCAGAGGATGTTGGTGCTGGAGGCAAGCAAAGTGACGAATCTGGGAAGATCTGCTTATGAAGTTGAGGTCAATACGCCACCTTCGGCTATTCTTGCACCACCTGGTTACTATATGCTATTTGTGGTTCATCAAGAAATCCCAAGTAACGGTATCTGGGTGCAACTAATATGA 1638 0.4976 MSSLLLLLAPLLFHLLLLSTIPSLTEAGSGQWQLLQNSIGITAMHMQLLHHDRVVIFDRTDFGLSNLTLPNGRCRQNPKELVVKTDCTAHALEYDVVSNSFRPLFVHTNVWCSSGSVSPDGRLIQTGGFNDGDRTVRMISPCPDCDWEEVGGGLAERRWYSTNHILPDGRQMIIGGRRTFNYEFYPKADAKNSYSLPFLVQTNDAGTENNLYPFVFLNVDGNMFIFANNRAILLDFDRNKVVRSYPQIPGGDPRSYPSTGSAVLLPLKNLQAKTVEAEVLICGGAPRGSYEQAIKGKFLPALNTCARIKITDPNPEWVMETMPGSRVMNDMVLLPNGNVLIINGAASGTAGWEAGRNPVLNPFLYKTNSPVGSRLELQNPSNIPRMYHSTAVLLRDGRVLVAGSNPHVYYNFTNVLFPTEFRLEAFSPSYLEPGFSNVRPTIVSPPSQAKLKYGQKLKLRFQVTTTLVQNMVTVTMLLPPFNTHSFSMNQRMLVLEASKVTNLGRSAYEVEVNTPPSAILAPPGYYMLFVVHQEIPSNGIWVQLI 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01175 545 Gene3D - 26 434 IPR037293 -
Accr4g01175 545 Gene3D Immunoglobulins 438 545 IPR013783 -
Accr4g01175 545 Pfam Galactose oxidase-like, Early set domain 439 543 IPR015202 -
Accr4g01175 545 FunFam Aldehyde oxidase GLOX 26 437 - -
Accr4g01175 545 SUPERFAMILY E set domains 435 544 IPR014756 -
Accr4g01175 545 Pfam Glyoxal oxidase N-terminus 44 284 IPR009880 -
Accr4g01175 545 CDD E_set_GO_C 434 544 IPR015202 -
Accr4g01175 545 SUPERFAMILY Galactose oxidase, central domain 91 432 IPR011043 -
Accr4g01175 545 PANTHER SECRETED PROTEIN-RELATED 14 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01175 Accr-Chr4 11178246 11179883 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01175 - - gmx:100816842 853.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr4g01175 4 11178246 11179883 Accr3g00102 3 1300087 1301730 CCT
Accr4g01175 4 11178246 11179883 Accr4g01175 4 11178246 11179883 ECH