Gene search

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01170 228 CDD MADS_MEF2_like 2 81 IPR033896 GO:0000977|GO:0045944
Accr4g01170 228 Coils Coil 78 112 - -
Accr4g01170 228 ProSiteProfiles K-box domain profile. 85 175 IPR002487 GO:0003700|GO:0005634|GO:0006355
Accr4g01170 228 PANTHER SERUM RESPONSE FACTOR HOMOLOG 3 167 - -
Accr4g01170 228 SUPERFAMILY SRF-like 3 96 IPR036879 GO:0003677|GO:0046983
Accr4g01170 228 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Accr4g01170 228 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Accr4g01170 228 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Accr4g01170 228 Pfam K-box region 82 168 IPR002487 GO:0003700|GO:0005634|GO:0006355
Accr4g01170 228 ProSiteProfiles MADS-box domain profile. 1 62 IPR002100 GO:0003677|GO:0046983
Accr4g01170 228 Gene3D - 13 84 IPR036879 GO:0003677|GO:0046983
Accr4g01170 228 SMART madsneu2 1 61 IPR002100 GO:0003677|GO:0046983
Accr4g01170 228 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 58 IPR002100 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01170 Accr-Chr4 11125979 11128562 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01170 1 227 MADS-box Gene Family AT3G54340 55.603 1.27e-89 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-MIKC Accr4g01170 K-box 3.8e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01170 K09264 - gmx:547720 356.681