Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01148 ATGGAATCTACCGATCTCCATCACCTTCATCAAGACCATGAATATCCTCACCACTCTTCCCCTTCTTCCACCCCCTCTCTCTTTCCCCATTCTTGGACCTCCGATATTGTTGCTCCTCTGAATGCTGGTAACTTGAGTCCAAATTTCCAAGAGGCAAATCCCAGATCAAGAGCTTTCACGCACAAGAAAGACATTGGAGGAGCTCATCATCATCATTCTGTGAACGCTTCAGGATTAGGTTATCATCATCAGTGGACGAGTGGGGAAGAAAGCTGCGTGAGAAGTACTCAGTCAGATCAGTACGACCTTGACCTTCACTATTCAAAGATAAAGGAAGAGAGCCCAGACGTTTTCCCCTGTAAATTCACTGATATGCTAAACAGTAATACTGGTTCCAGCAATATGGAGAACAAAGATTTCAATGCTCTTAGTGCTGACAAGCTCTTGCTCAAAACTCTATCTTCTGGAGACTTCTATTCAACTTCTACTTCTCATAATTTTGCTAATAATTTTGGTGGTGGTGGTGGTCGTGGTTTGGGTATGGGAGTGACACCTAGTAGAAGGACGAGCTTTAGCCAGATTTACCCAAGTATTAATATTTCAAACTTAAATAACCATTCTTCTAATTCCCCAGCTATTTCAAGCTCTTTGGATATGAACATGCAGAGCTCAGATCTATTGAACTCTGCAAGATTTAATGGCAGTTTGAGCCTACATGCCCAAGATGGTTTGGCCAGATTTGACAACGTTTCTTTTCGTCTCGATCATGATATGCATCAGCACCACCAAATCGAGAGGTCTTCGTGCGACTTGAGTAATCCATCACACTTCAGTAATGGAATGGGAGAAACGAAGAGGCCCAGCACAAGTTTGGTGGAGTCAAAGGCTTCATGTCAATCTCAAAATGTGACAAAAAAATCACGATTGGAATCGCGCTCATCATGCCCACCCTTTAAGGTTAGGAAAGAGAAACTTGGAGATAGGATTGCGGCTCTTCAACAGTTGGTGGCTCCTTTTGGCAAGACAGACACAGCATCCGTACTCATGGAGGCCATTGGATACATCAAATTCCTTCAAAGCCAGGTCGAGACACTAAGCGTTCCATACATGAAGTCGTCACGGAACCAGAGCAACAGAGCCATGCAAGGGGTTGCAGGGTTAAGTACTGGGGCGAGAGAAGAACCAAAAATGGATCTAAGGAGCCGAGGCCTTTGTCTCGTGCCTTTGTCATGTATGTCTTACTTGGCTGACGGGGCTGTTGCTGGTGCTAGTGCTGGTGGTGGAATGTGGCAACAACCTGATTTTGGTGGCCCATCGCTATGA 1323 0.4497 MESTDLHHLHQDHEYPHHSSPSSTPSLFPHSWTSDIVAPLNAGNLSPNFQEANPRSRAFTHKKDIGGAHHHHSVNASGLGYHHQWTSGEESCVRSTQSDQYDLDLHYSKIKEESPDVFPCKFTDMLNSNTGSSNMENKDFNALSADKLLLKTLSSGDFYSTSTSHNFANNFGGGGGRGLGMGVTPSRRTSFSQIYPSINISNLNNHSSNSPAISSSLDMNMQSSDLLNSARFNGSLSLHAQDGLARFDNVSFRLDHDMHQHHQIERSSCDLSNPSHFSNGMGETKRPSTSLVESKASCQSQNVTKKSRLESRSSCPPFKVRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQSQVETLSVPYMKSSRNQSNRAMQGVAGLSTGAREEPKMDLRSRGLCLVPLSCMSYLADGAVAGASAGGGMWQQPDFGGPSL 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01148 440 FunFam Transcription factor bHLH123 family 319 381 - -
Accr4g01148 440 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 129 413 - -
Accr4g01148 440 MobiDBLite consensus disorder prediction 265 315 - -
Accr4g01148 440 CDD bHLH_AtbHLH_like 316 366 IPR045239 -
Accr4g01148 440 MobiDBLite consensus disorder prediction 1 17 - -
Accr4g01148 440 MobiDBLite consensus disorder prediction 267 311 - -
Accr4g01148 440 Gene3D - 319 382 IPR036638 GO:0046983
Accr4g01148 440 MobiDBLite consensus disorder prediction 1 27 - -
Accr4g01148 440 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 309 358 IPR011598 GO:0046983
Accr4g01148 440 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 319 371 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01148 Accr-Chr4 10907405 10911892 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01148 121 414 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27660 48.125 4.49e-66 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01148 - - pcin:129318806 553.518