LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Accr4g01133	ATGGCCAAAACTACTACCACTCTCCCTAAAGCTCTGGACCTTTCACCGACTTCTCAGGTCAAGGTGCATCGTTCAATATGCCTCCAGCTTGGGAAACTCACTGAAAAAATTTCGCAAATTGTACTAGCCATTGAATCCGCCCGGCCGAACTGTGCGTTAGCAGTTCGGGCATTGTGCTCCTTAAATTTCACTTTGGATAAGGCCAAGTCAATTATCCAGCAATGTTCTCACTCCAGTAAACTCTACCTGGTAATCATGGCACACAAGATAGTTTCAAGATGTGAAAAAATACGAAGTGATCTGGAGTTATATTTGACCCAAATTCAACAAATGGTCCCAATTTTGTTGGATGCTGAGATATCTGGAATCATACAAGAACTTAGAGCTGCAGAATTTTCCTTGGAATTCGCAGAAGATGAAGCTAGGAAGGCATTACTGGAACTGCTTGAGAAGGACTTGCCCGGATCAGAATCTATAGAAGAAGTTGAGCTTGATGCTGTTCAGATCGCAACTTTGAGGTTGAAAATAACATCTCCTTTAGCTCTCTCAGAGGAGAAAGCAGCTCTCAAGTTGCAGATTGAAAAATCCAACGATACAGATCAAAGGGAGATGGAACTTGTGAAATACTTGTTATATCTTGTCATCAAATATAGGAAATACATATGTCAGTTTGATAAGCATGTCCGGCATCATCAGTCTATGGAGCATGAGCTGGATGTGAATGGTTAA	729	0.4143	MAKTTTTLPKALDLSPTSQVKVHRSICLQLGKLTEKISQIVLAIESARPNCALAVRALCSLNFTLDKAKSIIQQCSHSSKLYLVIMAHKIVSRCEKIRSDLELYLTQIQQMVPILLDAEISGIIQELRAAEFSLEFAEDEARKALLELLEKDLPGSESIEEVELDAVQIATLRLKITSPLALSEEKAALKLQIEKSNDTDQREMELVKYLLYLVIKYRKYICQFDKHVRHHQSMEHELDVNG	242

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Accr4g01133	242	Gene3D	-	16	112	IPR036537	GO:0007166
	Accr4g01133	242	Coils	Coil	127	147	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Accr4g01133	Accr-Chr4	10809292	10810467	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Accr4g01133	21	191	U-box Gene Family	AT4G36550	39.181	1.51e-35	131

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Accr4g01133	-		-	gmx:100796783	235.728