Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01106 ATGAAACAGTTCCTCATACCTCTCTTCATCCTATACTTTGCATCTTCAAATGCTAGAGCAGAGCAGAATTACTCAGGAAACTCAGTACTCGACTGCACCATAAACGATCAAAACGGGCCTTCATCTGCTTTCCTTTACACCTGTAATGGCCTCGGCAAATCGTGTTCGACCTTCCTCATCTTCCAGTCCCAACCTCCTTACAACACCATTACCTCAATTTCTAACCTGACATCATCGGACCCAGAAAAGCTCGCTACGGTCAACAACGTTTCAATGTTCACTGTGTTCCCGACAGGCAAAGAGGTAATTGTCCCTGTAAACTGTTACTGCAAAACTAAGGACTATTACCAGGCGGATACCAATTATACCTTGCCCACAATCCAAACTTATTTCACAATAGCAAACAACACTTTTGAGGGATTGTCCACTTGTAATTCTCTCTTGCGTTTCAATCCATATGGGGCTTTAGACTTGCTTGTTGGGATGCAGTTACATGTGCCTCTACGATGTGCCTGTCCAACTCAGTCTCAAATTGAAAGTGGCACCAAGTATTTACTAACTTACCCAGTTGACTGGGGTGATAGTGTCTCATCTCTTGCTGCAAGATTCAAAGTGAGTTCAAGTTCTGTACTTGAAGCTAATGTCATTACCACACCCGCTCTTTATCCATTCACAACTCTTCTGATTCCTTTGCCTGGTGAACCTGACAGTTCAACCACCATAGTTCATTCTGGTCAACCACCAACTTTTTCTCCTCCCGTTCCTCCCACCAAAAAAAGCAAGAAGGCAAAAACAAAACTCTCTGTCGCTGTTGGCACCACAGGAGGGTTTTTGCTGGTTGTGTGTGTGATTTTGTTTTCTGTGTTTCTGATGAGGAAGAGATCGGCGGCAACTTTCGTTGAGGCATGTAAAGTAAGAAAAACCAAGTCTTCAGAAGATATTCGAGACGAGATTGCAGGGATTGAGCATTTTTCTAAAGAGTACAGATTTGAGGAGATAAAGGAGGCGACTGAGAATTTCAGTTCAAAGAATAGAATTGGAGGCTCTGTGTACAAGGGATTGTTTGGCAAGGATATCTTGGCTGTCAAGAAAATGAGTTCAGATGCGTCCAAAGAAGTGAATATGCTGAAGAAGATCAATCACTTCAACGTCATAAAACTTCAAGGATACTGTAAAAACGACGAAGGCTTCTTCTACCTAGTTTTCGAATACATGGAGAATGGTTCGCTAAGAGAGTGGCTAGAGAAAAACATACCCATGGAGCACGAGAGTTGGGACAAGAGGATCCAGATTGCTCTGGATATTGCCAATGGACTTCAATATCTTCACAACTTCACTGAACCTTGCTATGTGCACAAGGACATCAACACTAGCAACATTCTACTAAACGAGGACGCGAGGGCCAAGATTGCGAATTTTCGCCTGGCAGAAGAATCAGAAGGGGATAATATAACTTGCACATCACAGGTGGTGGGAACTAGAGGCTATATGGCTCCAGAGTATCTAGAAGCAGGATTGGTTAGTCCCAAAATGGACGTGTACGCCTTTGGAGTGGTTTTGCTGGAACTGATCACAGGGAAAGTTTCTATCATTGTACAAGCTGGAACTGAAGTAATGCTTTCTGCAGTCATAGGGTCTGTGATGGCAAAGGACGATGCAGAAGCCAATCTTAGTTCATTCATTGATCCTAGCCTTGTTGGAAGCAGTGGGGAAGCATGTGCTTTTGAGCTAGCTAAAATAAGTGTAGCCTGCTTAATCAGAGAACCAGCAAGGAGACCAAGCATGGCAGACATAGTTTCTAGCTTGTTAAGGATACAGAGGAATGTGCCTCCAAGAATATCACCCACCATGAATAGCAACAGTCAACGCATGGGGAGGTGA 1881 0.4359 MKQFLIPLFILYFASSNARAEQNYSGNSVLDCTINDQNGPSSAFLYTCNGLGKSCSTFLIFQSQPPYNTITSISNLTSSDPEKLATVNNVSMFTVFPTGKEVIVPVNCYCKTKDYYQADTNYTLPTIQTYFTIANNTFEGLSTCNSLLRFNPYGALDLLVGMQLHVPLRCACPTQSQIESGTKYLLTYPVDWGDSVSSLAARFKVSSSSVLEANVITTPALYPFTTLLIPLPGEPDSSTTIVHSGQPPTFSPPVPPTKKSKKAKTKLSVAVGTTGGFLLVVCVILFSVFLMRKRSAATFVEACKVRKTKSSEDIRDEIAGIEHFSKEYRFEEIKEATENFSSKNRIGGSVYKGLFGKDILAVKKMSSDASKEVNMLKKINHFNVIKLQGYCKNDEGFFYLVFEYMENGSLREWLEKNIPMEHESWDKRIQIALDIANGLQYLHNFTEPCYVHKDINTSNILLNEDARAKIANFRLAEESEGDNITCTSQVVGTRGYMAPEYLEAGLVSPKMDVYAFGVVLLELITGKVSIIVQAGTEVMLSAVIGSVMAKDDAEANLSSFIDPSLVGSSGEACAFELAKISVACLIREPARRPSMADIVSSLLRIQRNVPPRISPTMNSNSQRMGR 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01106 626 ProSiteProfiles Protein kinase domain profile. 288 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g01106 626 Pfam LysM domain 193 230 IPR018392 -
Accr4g01106 626 Gene3D Transferase(Phosphotransferase) domain 1 405 619 - -
Accr4g01106 626 Gene3D Phosphorylase Kinase; domain 1 309 404 - -
Accr4g01106 626 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 6 608 - -
Accr4g01106 626 FunFam PTI1-like tyrosine-protein kinase 3 405 612 - -
Accr4g01106 626 SUPERFAMILY Protein kinase-like (PK-like) 324 604 IPR011009 -
Accr4g01106 626 CDD LysM 187 229 IPR018392 -
Accr4g01106 626 SMART LysM_2 187 230 IPR018392 -
Accr4g01106 626 Gene3D LysM domain 185 230 IPR036779 -
Accr4g01106 626 Pfam Protein kinase domain 360 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g01106 626 MobiDBLite consensus disorder prediction 238 259 - -
Accr4g01106 626 ProSiteProfiles LysM domain profile. 186 229 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01106 Accr-Chr4 10570449 10572329 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01106 4 605 Receptor kinase-like Gene Family AT2G23770 39.520 1.18e-128 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Accr4g01106 Pkinase 4.4e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01106 - - gmx:100806221 703.36