Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01100 ATGGATGAACTCCACTGTAGTATCGTGGTGATGAATGGTTCGCAGCCAAAAGTTTTAAGGCTTAATTTAGGGTCCTCTGATGAATTCCAAAGCCCCACCTTTTCTGCTGCCTCTTCCCCGGGAATAGATATTGGTAGGCTACGAGGTCACCGATTAAAGCCCTCCACCCCAGTCAGCAGCCCTGAAGAATTAGCTACTTCCAATACAACATCTACTTTAGTAAACTCAGTGTCATCTTCTGACACTACAACTTCTTTTTTCCTGGTCTATGAACAAAATCCTCTGTTCGAGGGTCAGGGTCCAGAGAAAAGGAAACACAGACCGATCAATGAACCAAAAAATTTCGACCGCCAGTCCCTATTAGCCTTTGAACTGGACAAGGAAAGAACTCTCAGTTTGACCAAATCCCCGGTATCATCTGTGGTTAGTGATGAGAAAAGTGTGTTTTGGAGTCCTCAAAGTCACTTTGTCGATGAGAAGCCTCAAATAACAGAAAACACTGGAAGTAGTCGTAGATCTAAATCTGCTACTTCTAAAACTTTACTAGAAAGATTTGTGCATTGTGATCAGGAGTTGTGGAGTGATGAAGTAGGACATAAGCAAACTCAAAGTGGAAATCATGTTTTGAAATCAGAACTTCCTGCAGTCAGAACTTCCTCAGTACCTCCTCCCCTATGCTCACACTGTCAAAACAAAGCACCAGTTTTTGGAAAACCTCCTAGACGCTTCCATTACAAAGAAATAGAGGAAGCCACTGATATGTTTTCAGATATGAATTTTTTGGCTGAAGGTGGATTTGGGACAGTTCACAAGGGAGTGCTACGAGATGGCCAGGTCGTTGCAGTGAAACAGTTAAGGTTTAGTGGCTCTCAGGCAGATCTTGATTTCTGTAGGGAGATCCGAGTATTGAGCTGCGCACAACACAGAAATGTTGTGCTGTTGATAGGATTCTGCGTAGAAGGCGATTTGAGGATATTACTCTATGAGTACATATGCAATGGATCCTTAGAGCTCTATCTTCATGGAAAGAACAGAGGCACTCTAGATTGGAACTCGCGCTTAAAGATAGCAATAGGAGCTGCACGAGGCCTACGCTACCTTCATGAGGATTGTAGAATGGGCTGTATAGTGCACAGAGACTTTCGACCCAGGAATATCCTCTTAACCCATGATTTAGAACCTGTGGTGGTGGATTTTGGCCTTGCAAGGTGGCAGTCAGAATGTAACATAAATGCTGATGATCGAGTTATTGGAACTTCAGGGTATCTTGCGCCGGAGTATCTTGATGCTGGAAATCTTACATATAAAGTAGATGTATATGCATTTGGAATTGTTTTGTTAGAGTTAGTAACAGGTCGAAGAATTAGTGAGTTTGAACATAATAACGGACCCTCGTATCTTTCCGAATTTTTTCACCCCCTGCTCATGGTAGAACCCAATCATATTTTAGAAAACCTCCAAATTCTGAATCCATGCTTGGAGCTTGAGTCGTCACAGGAATTTAATCTTCAGTTACAAGCAATGGCCCGTGCAGCTTCCTTGTGTCTTCGTCTAGATCCTGATGCCAGGCCCCCAATGTCGAAGATCCTCAGAATGCTGGAAGGGGGCGATCCAGTTCGTCCAATTGGATTAGACCTAAACTCAGTTGGTAACACAAGCGGGCATTTAAGTGGATTGAAATCCCACTCTCAACCTAAAGGTACAAGAAGCCACTCTCGCAGGCTCTCACATTGA 1734 0.4343 MDELHCSIVVMNGSQPKVLRLNLGSSDEFQSPTFSAASSPGIDIGRLRGHRLKPSTPVSSPEELATSNTTSTLVNSVSSSDTTTSFFLVYEQNPLFEGQGPEKRKHRPINEPKNFDRQSLLAFELDKERTLSLTKSPVSSVVSDEKSVFWSPQSHFVDEKPQITENTGSSRRSKSATSKTLLERFVHCDQELWSDEVGHKQTQSGNHVLKSELPAVRTSSVPPPLCSHCQNKAPVFGKPPRRFHYKEIEEATDMFSDMNFLAEGGFGTVHKGVLRDGQVVAVKQLRFSGSQADLDFCREIRVLSCAQHRNVVLLIGFCVEGDLRILLYEYICNGSLELYLHGKNRGTLDWNSRLKIAIGAARGLRYLHEDCRMGCIVHRDFRPRNILLTHDLEPVVVDFGLARWQSECNINADDRVIGTSGYLAPEYLDAGNLTYKVDVYAFGIVLLELVTGRRISEFEHNNGPSYLSEFFHPLLMVEPNHILENLQILNPCLELESSQEFNLQLQAMARAASLCLRLDPDARPPMSKILRMLEGGDPVRPIGLDLNSVGNTSGHLSGLKSHSQPKGTRSHSRRLSH 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01100 577 ProSiteProfiles Protein kinase domain profile. 255 540 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g01100 577 Gene3D Transferase(Phosphotransferase) domain 1 331 538 - -
Accr4g01100 577 MobiDBLite consensus disorder prediction 553 577 - -
Accr4g01100 577 MobiDBLite consensus disorder prediction 48 76 - -
Accr4g01100 577 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 227 330 - -
Accr4g01100 577 FunFam Os07g0541700 protein 331 419 - -
Accr4g01100 577 SUPERFAMILY Protein kinase-like (PK-like) 235 534 IPR011009 -
Accr4g01100 577 MobiDBLite consensus disorder prediction 59 76 - -
Accr4g01100 577 Pfam Protein tyrosine and serine/threonine kinase 260 532 IPR001245 GO:0004672|GO:0006468
Accr4g01100 577 Gene3D Phosphorylase Kinase; domain 1 220 330 - -
Accr4g01100 577 PANTHER OS01G0750732 PROTEIN 166 537 - -
Accr4g01100 577 ProSitePatterns Tyrosine protein kinases specific active-site signature. 376 388 IPR008266 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01100 Accr-Chr4 10494140 10496425 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01100 230 529 Trihelix Transcription Factor Family AT1G68690 43.333 2.28e-74 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Accr4g01100 PK_Tyr_Ser-Thr 1.8e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01100 - - gmx:100813141 833.558