Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01097 ATGCCGCCAAAGCTCGATCCTTGCCAGGTCGTGGACGTCTTTGTTCGAGTGACGGGTGGTGAGGTTGGTGTGCGACCAGCGATCGGTCCCCTAGATCTTTCTCCAAAGAAGATCGGTGAAGACATCGCCAAGGAGACCGCAAAAGACTGGAAGGGTCTGCGGGTCACTGTGAAGCTAACTGTTCAGAACCGGCAGGCCAAGGTGTCGGTGGTCATTGAGATTGCCAAAACTATGCGGCCCAGATCCATGGCCAAGGATTTTAGCGGAACCCTGAAGGAGATTCTCGGAACTTGTGTTTCGGTTGGATGCACTGTGGACGGCAAGGACCCTAAGGATCTGCAGCAGGAGATAATCGACGGAGATGTTGAAATCGATCTGATTCTAGTAATTCAAATTGAGCTCATGCTTTTTTGGCATTTCTATTCCTTTTTCTGGAAAGAAAATTTCACATTTTCCAAAGTATATTCCTGGATTTTTTTTTCCTTCCTGTTTCTTGATCATCCTTTTTTCAAGGGAAAAAGAGGAGCAACGCGGGTGAACGAAATGGTTAGTGTTGAGGTTATTATTAGTTGA 573 0.4677 MPPKLDPCQVVDVFVRVTGGEVGVRPAIGPLDLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVVIEIAKTMRPRSMAKDFSGTLKEILGTCVSVGCTVDGKDPKDLQQEIIDGDVEIDLILVIQIELMLFWHFYSFFWKENFTFSKVYSWIFFSFLFLDHPFFKGKRGATRVNEMVSVEVIIS 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01097 190 SMART rl11c 13 106 IPR000911 GO:0003735|GO:0005840|GO:0006412
Accr4g01097 190 SUPERFAMILY Ribosomal L11/L12e N-terminal domain 1 71 IPR036796 -
Accr4g01097 190 PANTHER 60S RIBOSOMAL PROTEIN L12 1 70 IPR000911 GO:0003735|GO:0005840|GO:0006412
Accr4g01097 190 Gene3D - 40 125 IPR036769 -
Accr4g01097 190 SUPERFAMILY Ribosomal protein L11, C-terminal domain 67 110 IPR036769 -
Accr4g01097 190 Pfam Ribosomal protein L11, RNA binding domain 67 105 IPR020783 GO:0003735|GO:0005840|GO:0006412
Accr4g01097 190 Pfam Ribosomal protein L11, N-terminal domain 15 65 IPR020784 -
Accr4g01097 190 FunFam Uncharacterized protein 91 125 - -
Accr4g01097 190 ProSitePatterns Ribosomal protein L11 signature. 92 107 IPR020785 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01097 Accr-Chr4 10447822 10448394 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01097 1 124 Cytoplasmic Ribosomal Protein Gene Family AT5G60670 63.804 2.84e-64 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01097 K02870 - qsu:112038294 204.912