Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01088 ATGTTCACTGCCTCTCAGTCACACCCAGTAATGAGAAGCTTAACACCATTTCCAGACCTTTCCTTGAACATTAGCCCTCCAGATTGTGAAGCCAAACAAGTTGTTGAGAGTTACACTAAAACGCCTCATCATCATTACAGCGAAATGTGTTCCACCTCCGATTCTGGAAGCAGTGAGAGTGATTTAAGCCATGAAAATGCCTTCTCACACCTTGGCTATCATCATCACAATCGCGAGCCTACTTTGAGCTTAGGCATCAAAACGGCAGATTTGAATCCCCTTAATAATCCACTCCCAGCCACCAGAAACGTGATTAATCACTTTCACAACCCCAAACCTCACATCTATGGCCGCGACTTTAAACGAAACACGACCAAAGTCCTCTCTGGTGGTGGTGTTAAAAGAAGCATCAGAGCTCCTAGAATGCGATGGACTACAACCCTACATGCCCATTTTGTTCACGCCGTTCAGCTTCTTGGCGGCCATGAAAGGGCCACTCCAAAGTCGGTGTTAGAGTTGATGAATGTAAAAGATTTAACCCTAGCCCACGTTAAGAGTCATTTACAGATGTATAGAACAGTGAAGAGCACTTCCAAATGTACAGGTCATGGCCACACTGATATCGGCTTAGCCGTTGCCGATGAACATGGAGCCGAAGCTCGTGAGAGAACCCATCTGACTCCGCCTCTTCAAAAATCTCACAGCAACAAGGAATCAAGGCAATCATCAACGGAGACAGGGACAAACGAGAGTAGACAAAAACCAGGAACGAGTTTGACGTATCCTCGAGTGAAGGCAAATGAAAGCATGGTGGTTGGAGGGTCATTGTCAGATTCTTCAGATGAGACGCTTAACCTAGAATTCACCCTTGGAAGACCCAGTTGGAACACACAGCAGCCTCAATCATCAACAGACTTAACTCTTCTCAATTGTTAA 936 0.4562 MFTASQSHPVMRSLTPFPDLSLNISPPDCEAKQVVESYTKTPHHHYSEMCSTSDSGSSESDLSHENAFSHLGYHHHNREPTLSLGIKTADLNPLNNPLPATRNVINHFHNPKPHIYGRDFKRNTTKVLSGGGVKRSIRAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKSTSKCTGHGHTDIGLAVADEHGAEARERTHLTPPLQKSHSNKESRQSSTETGTNESRQKPGTSLTYPRVKANESMVVGGSLSDSSDETLNLEFTLGRPSWNTQQPQSSTDLTLLNC 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01088 311 Gene3D - 139 196 - -
Accr4g01088 311 MobiDBLite consensus disorder prediction 218 266 - -
Accr4g01088 311 SUPERFAMILY Homeodomain-like 137 194 IPR009057 -
Accr4g01088 311 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 18 298 IPR044847 GO:0000976|GO:0006355|GO:0010158
Accr4g01088 311 FunFam Myb family transcription factor 138 196 - -
Accr4g01088 311 MobiDBLite consensus disorder prediction 291 311 - -
Accr4g01088 311 NCBIfam myb-like DNA-binding domain, SHAQKYF class 140 193 IPR006447 GO:0003677
Accr4g01088 311 MobiDBLite consensus disorder prediction 229 264 - -
Accr4g01088 311 Pfam Myb-like DNA-binding domain 141 192 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01088 Accr-Chr4 10333057 10336205 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01088 6 207 G2-like Transcription Factor Family AT5G42630 52.885 1.00e-48 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Accr4g01088 Myb_DNA-binding 1.3e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01088 - - gmx:100778242 284.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g00205 3 2206361 2208650 Accr4g01088 4 10333057 10336205 CCT
Accr4g01088 4 10333057 10336205 Accr4g01088 4 10333057 10336205 ECH