Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01044 ATGGAAGGTTACGACGGCACTGTCAGGCTTGGAGCTCTTCACATGAACCATGATCGCAATGAATTTGACTCCGGCCCTGATGTGTCGGTTTCCTCTCCAGTTACCAGACAGAAGGCCGCCGCCGCTAAGCAGTTCATTGAAAATCACTACAAGAATTATCTCCAAGGATTGCAGGATCGAAAAGAGAGACGTAGAGAACTTCAAAGGCAAGCACAAGAAGCTCAAATATCAACCGAAGAACAAGAGGAAATGATGAGGAATTTGGAGCGGCGAGAGACTGAGTTCATGAGAGTGCAGAGACGTAAAGTTGGAATTGATGACTTTGAGCAGTTAACCGTAATTGGTAAAGGTGCTTTTGGTGAGGTGAGATTATGTCGTGCTAAAAGTACTGGAGAGATTTATGCCATGAAGAAATTGAAGAAATCAGAGATGCTTAGCCGAGGACAGGTGGAACATGTTCGATCTGAGAGGAATTTGCTAGCAGAGGTTGATAGCCGATGCATTGTAAAACTTCATTACTCATTCCAAGATTCTGATTTCCTGTATCTCATAATGGAGTACTTACCCGGTGGTGACATTATGACATTATTAATGAGAGAAGATATCCTTTCTGAAGATGTTGCTCGCTTCTACATTGCTGAAAGCATCTTAGCCATCCACTCGATACATCAACATAATTACGTACACAGGGATATAAAACCAGATAATTTGATACTGGATAAAAAGGGCCATCTGAAGCTGTCAGATTTCGGCTTATGTAAGCCTCTTGATGATAAGTACTCTACAATTTTGTTGGAAAGTGAAGAATTCACCGGTAATGAATCAATAAGCGAGGCTGATGGATATTCTGCATCCCCTTGGTCGATGCCAAAGGAGAAATTACTACATTGGAAACGTAATCGCAGAGCATTGGCATATTCAACTGTTGGAACTCTTGATTACATGGCACCTGAAGTTTTGCTCAAAAAGGGCTATGGAATGGAATGTGATTGGTGGTCTCTTGGAGCTATCATGTACGAGATGCTTATCGGATATCCCCCCTTTTGTTCTGATGATCCAAGGATGACATGTCGTAAGATAATCAACTGGAAAACATGCCTTAAATTCCCTGGAGAACCCAAGATATCAGCCGAGGCCAAGGATCTGATTTGTCACTTATTATGTGATGTGGAAACAAGACTTGGAACCAGAGGTGTCGAGGAAATAAAGGCTCATCCATGGTTCAAATCTATTCAGTGGGATACGCTTTATGAAATGGAAGCTGCATATAAACCTACTGTCACCGGAGACTTGGACACACAAAACTTTGAGAAGTTTCCTGATTTAGAAGGACCACCATCTGCAACAGCTACTGTGGGACCTTGGCGGAAGATGTTAACATCTAAAGACACCAATTTCATTGGATTTACATTTAAGAAATCCGACGTCCTTAAATCAATAGGAAATTCAGATACAGATGTCAAATTGCATGGATCATCACAAACTCCATCCGTAATTTCTTTGTTAGGTCGTATTAATTTGCAAGACACTGCCATTCCAGAAAGTGAGCAGAAACCAGACGCTTGA 1566 0.417 MEGYDGTVRLGALHMNHDRNEFDSGPDVSVSSPVTRQKAAAAKQFIENHYKNYLQGLQDRKERRRELQRQAQEAQISTEEQEEMMRNLERRETEFMRVQRRKVGIDDFEQLTVIGKGAFGEVRLCRAKSTGEIYAMKKLKKSEMLSRGQVEHVRSERNLLAEVDSRCIVKLHYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESILAIHSIHQHNYVHRDIKPDNLILDKKGHLKLSDFGLCKPLDDKYSTILLESEEFTGNESISEADGYSASPWSMPKEKLLHWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPFCSDDPRMTCRKIINWKTCLKFPGEPKISAEAKDLICHLLCDVETRLGTRGVEEIKAHPWFKSIQWDTLYEMEAAYKPTVTGDLDTQNFEKFPDLEGPPSATATVGPWRKMLTSKDTNFIGFTFKKSDVLKSIGNSDTDVKLHGSSQTPSVISLLGRINLQDTAIPESEQKPDA 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01044 521 SMART pkinase_C_6 409 473 IPR000961 GO:0004674|GO:0005524|GO:0006468
Accr4g01044 521 PANTHER SERINE/THREONINE-PROTEIN KINASE 29 458 - -
Accr4g01044 521 Coils Coil 50 91 - -
Accr4g01044 521 Pfam Protein kinase C terminal domain 427 471 IPR017892 GO:0004674|GO:0005524|GO:0006468
Accr4g01044 521 FunFam Non-specific serine/threonine protein kinase 192 259 - -
Accr4g01044 521 FunFam Non-specific serine/threonine protein kinase 307 426 - -
Accr4g01044 521 CDD MobB_NDR_LATS-like 42 103 - -
Accr4g01044 521 ProSiteProfiles AGC-kinase C-terminal domain profile. 409 481 IPR000961 GO:0004674|GO:0005524|GO:0006468
Accr4g01044 521 ProSiteProfiles Protein kinase domain profile. 108 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g01044 521 SUPERFAMILY Protein kinase-like (PK-like) 84 459 IPR011009 -
Accr4g01044 521 Gene3D Phosphorylase Kinase; domain 1 78 191 - -
Accr4g01044 521 Gene3D Transferase(Phosphotransferase) domain 1 192 259 - -
Accr4g01044 521 Gene3D Transferase(Phosphotransferase) domain 1 307 426 - -
Accr4g01044 521 SMART serkin_6 108 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g01044 521 FunFam Non-specific serine/threonine protein kinase 79 191 - -
Accr4g01044 521 ProSitePatterns Serine/Threonine protein kinases active-site signature. 227 239 IPR008271 GO:0004672|GO:0006468
Accr4g01044 521 Gene3D Phosphorylase Kinase; domain 1 427 437 - -
Accr4g01044 521 Pfam Protein kinase domain 108 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g01044 521 Pfam Protein kinase domain 305 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g01044 521 CDD STKc_NDR_like 106 472 - -
Accr4g01044 521 ProSitePatterns Protein kinases ATP-binding region signature. 114 137 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01044 Accr-Chr4 9904284 9911026 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01044 1 509 AGC Kinase Gene Family AT5G09890 77.734 0.0 833
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Accr4g01044 Pkinase 7.8e-44 CL0016