Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Accr4g01030 | ATGCAAGGGACAAGGGGTAGGCTAGGTTCTTTGCCTGAAACATTGGAATTTGATTGTGGTTCTACTTCAAGTAATTCTACTGTGGATCAGCAGCAGATTTGCTGGGATGGCATGGGGAGCCCTGTGGAAAATCAAATGCATCCATTTATGCTTTCACCTGGTGGTATCAACCCATTGTATGCAAATTCAACTGACCAGGAATGGAAGAGCGTGAATAATTGGAGAATTGGTGAGTCAAGTTCCAGTGGTTCTCATGTTCAAATTAACAATAATGAGCAGAAAAGAGAATTTGGATGGTCATCTTCTACAAGTGCTGATGCTGTTGTCAGTTCAAGATTAGAGCGACAATTTGACTCAACCAATTTACTTTCATTGGACAACGTCAATACAAGTCCTTTGTGTATGAACAACTCCAATTCTCATTCTGTAACACAGAATACCAACCTAAATGCCAGTTTAGGAGACACTGGCTGTAATATGGGGCAACATCTTGGGCTTCCTGTCTTGAGCAAATCAAATGGATCAGTAAATGAGCTTATCCCACCTACTGTTGGCTCTGTGCCCTTTGCTCATCCTTCTGGAAGTAACATGGTAGATAATGGTAGTGTTAGGCTGGGGTGTTGTTTTGATGCCCGGCATGTATCTTGTAAAAGAAAGGCTGTTGAAGGATATGTTGGACAATCTTCAGTTGGTGAAAGTTCTAGCTGCAGCCAGTATGCAGAAAGCAGGGCTTGGCATACCCTTCCTTCTCAGAGTAATTCTCGGAGCAGTTTAAGCAGATCTGCTTCATCAGCACAGATAAGTTCAAGACCTGGCCTGGATGTTGGCTGTGAAGTGGGGGATGACTCTTCAGAGAGCAATAATAATTTAAATGTTGCAGGGAGCTCAAATAGCTTCCTCAGGAATTCCCGTTTGAGGATAAATCCTTCAAACCAACAGGATTCCATTCCTTATGTTGCATTCTCAAATGGCAGTGTAACTAGGCGTTCTACAATTCCTTCATCATCTCCTATGACACACAGTTTTTGTCCTGTTGGTAATTCTCTGGATTTGGGGTCAGCACCATATGCAGATGATATGGTTCCTCAAAGTCAGCCCCTTGGAACTTGTTCTCCTCCTATTCACAGGAATATGGCATCATTTAGGTGGAGTGGCAGCTCTAACTTGAGAAATAGCCATTTGTCAAGCTCAATGATTTGGTCAGACAGGGATAATCTACTGCATGAAGAAGGAAGCTCTACGAGCATGTTTGAACATCCAATGTTTATGCCAGTGGCTGATTTAAGAAATTCGGTTCAAAATCCAACCAACAGAGCTTCGAGTTCAAATTTAAACATATCAGGAAATGTCACTTCCTCACTGCATGCTGGGTTTAGTTCAGGCATCAGTTCGCCATCTGCTCCATCCTGGGTTTCTCATCCCAATCCTCTACATCATCCACGGAGGTTATCTGATTATGCTCATAGATCATTGTTGTCTTCTGGCTCTGAGGCTGCTGCAGGTTTCAACAATAGCAATTCTTCCTTGCACTCTGCTCCTATTGCTTCATCTGAAGCAAGGGCACCATCATCTCGAGCTGGTAGTCAAGGACGTAATCAGTCACGCTCAAGGTCACCATGGGTGGATAGGCGAGTCGATAGTAACTTGAGACTTCCTTATTCATTGCACACTCTGGCTGTTGCCAGTGAAGGAAGTAGGAGACTTGTATCTGAGCTCCGCAGTGTTTTGGGTCTCATGCATAGGGGAGGGAACCTTCAGTTTGAGGATTTTATGATCTTTGACCATTCAGTATTTTCTGGAATGGCTGATATTCAGGACCGACACCGGGACATGCGACTTGACGTTGATAACATGTCTTACGAGGAGTTATTGGCTCTGGAGGAACGGATTGGAAATGTGAGTACTGGATTAAGCGAGGAAACCATATTGAAACTATTAAAACAGAGGAAGTATTCAGTTGAAGAAGGGTCTCAATGTGACGCAGAACCCTGCTGTGTGTGTCAGGAAGAGTTTGACAATGGACATGACGTTGGAACACTCGATTGTGGCCATGATTACCATACGAACTGCATCAAACAGTGGTTAAAGCAGAAGAATCTGTGCCCGATTTGCAAGACAACAGGCTTGGCAACGTGA | 2136 | 0.4377 | MQGTRGRLGSLPETLEFDCGSTSSNSTVDQQQICWDGMGSPVENQMHPFMLSPGGINPLYANSTDQEWKSVNNWRIGESSSSGSHVQINNNEQKREFGWSSSTSADAVVSSRLERQFDSTNLLSLDNVNTSPLCMNNSNSHSVTQNTNLNASLGDTGCNMGQHLGLPVLSKSNGSVNELIPPTVGSVPFAHPSGSNMVDNGSVRLGCCFDARHVSCKRKAVEGYVGQSSVGESSSCSQYAESRAWHTLPSQSNSRSSLSRSASSAQISSRPGLDVGCEVGDDSSESNNNLNVAGSSNSFLRNSRLRINPSNQQDSIPYVAFSNGSVTRRSTIPSSSPMTHSFCPVGNSLDLGSAPYADDMVPQSQPLGTCSPPIHRNMASFRWSGSSNLRNSHLSSSMIWSDRDNLLHEEGSSTSMFEHPMFMPVADLRNSVQNPTNRASSSNLNISGNVTSSLHAGFSSGISSPSAPSWVSHPNPLHHPRRLSDYAHRSLLSSGSEAAAGFNNSNSSLHSAPIASSEARAPSSRAGSQGRNQSRSRSPWVDRRVDSNLRLPYSLHTLAVASEGSRRLVSELRSVLGLMHRGGNLQFEDFMIFDHSVFSGMADIQDRHRDMRLDVDNMSYEELLALEERIGNVSTGLSEETILKLLKQRKYSVEEGSQCDAEPCCVCQEEFDNGHDVGTLDCGHDYHTNCIKQWLKQKNLCPICKTTGLAT | 711 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Accr4g01030 | 711 | MobiDBLite | consensus disorder prediction | 503 | 541 | - | - | |
Accr4g01030 | 711 | FunFam | E3 ubiquitin-protein ligase MBR2 | 632 | 709 | - | - | |
Accr4g01030 | 711 | MobiDBLite | consensus disorder prediction | 503 | 536 | - | - | |
Accr4g01030 | 711 | ProSiteProfiles | Zinc finger RING-type profile. | 664 | 705 | IPR001841 | - | |
Accr4g01030 | 711 | Pfam | Ring finger domain | 664 | 705 | IPR001841 | - | |
Accr4g01030 | 711 | SMART | ring_2 | 664 | 704 | IPR001841 | - | |
Accr4g01030 | 711 | SUPERFAMILY | RING/U-box | 652 | 707 | - | - | |
Accr4g01030 | 711 | MobiDBLite | consensus disorder prediction | 281 | 295 | - | - | |
Accr4g01030 | 711 | MobiDBLite | consensus disorder prediction | 247 | 270 | - | - | |
Accr4g01030 | 711 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE RNF165 | 212 | 709 | IPR045191 | GO:0061630 | |
Accr4g01030 | 711 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 627 | 708 | IPR013083 | - | |
Accr4g01030 | 711 | MobiDBLite | consensus disorder prediction | 247 | 295 | - | - | |
Accr4g01030 | 711 | MobiDBLite | consensus disorder prediction | 1 | 28 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Accr4g01030 | Accr-Chr4 | 9785256 | 9788499 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Accr4g01030 | 1 | 711 | C3H Transcription Factor Family | AT2G15530 | 32.129 | 8.42e-75 | 253 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Accr4g01030 | - | - | pcin:129295490 | 1016.14 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Accr3g01040 | 3 | 11777860 | 11781466 | Accr4g01030 | 4 | 9785256 | 9788499 | CCT | |
Accr4g01030 | 4 | 9785256 | 9788499 | Accr4g01030 | 4 | 9785256 | 9788499 | ECH |