Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01029 ATGGAAGAGCCTCAGTGCTCCAGAGCTACTTTGCCTGCCTCACTCCCACCCGGTTGCGGTTTCTATCCTTCTGAAGAGCAGTTGCTCTGTTACTATTTACCCAACAAGAACGCTGGCGGAAATTTCCATGGCTGCGATCTGATCAGGGAGCTTGACCTGTACGATTATGATCCTTTCCAATTACCTGAAATTGCGTGCTTTTCCTATGGTTATGGCGGAAGGAAGAGGCATTGGTACTGTTACACTGCCAGGGTTTTGAAGGATTCTAGAAGGAAGATTAGGATGGTCAAGAGCGGGCATTGGATGAGAAAGGGACAGGTTAGGAATGTTTTGAATGGCAGTGGGAATGTCGTCTTGGGCACCAGGACCTCTTTCGTTTTTTATCTGCGGAATTCTCCCAAGAACGCAAACCGGACGACTTGGATGTTGCATGAGTATGCATTAGTCGATCATCTAAAGGCTTCATTTGTTATTTGTCGAGTATTCTGTAAAGCACATCAGAAGAATAGTGTGTCAGAGAATGGTCTGAGTTCCTGCGCAGAGGAAGGTTTCTCAGCTGGGCGTCGCATTGGCATTCAGCATAATGGATATTTTTCACCCGATATAATTGAGACTCAAATGCGTGGTGACTGCTCCATTGAGAGAAAGATTCCAGTGTCTCCCTTGAAGCCTGCTAGTGAACTAGATGAGAATCAAATTGCAGCTGGATCAGCTTCTGTTGCTACTTTCCACTGTAGTGCAGGCCCTCAAGACAGTCAAACGGGAAAGTTTTCTGGACTTCCTGGTGATGGTGCAATATTTGTTGAGGAATTGGCATCTCCACAACATTTACGTTCGATTCTAGAGGACGATTTCATAGAGTTGGATGATCTAGCTTGA 879 0.4573 MEEPQCSRATLPASLPPGCGFYPSEEQLLCYYLPNKNAGGNFHGCDLIRELDLYDYDPFQLPEIACFSYGYGGRKRHWYCYTARVLKDSRRKIRMVKSGHWMRKGQVRNVLNGSGNVVLGTRTSFVFYLRNSPKNANRTTWMLHEYALVDHLKASFVICRVFCKAHQKNSVSENGLSSCAEEGFSAGRRIGIQHNGYFSPDIIETQMRGDCSIERKIPVSPLKPASELDENQIAAGSASVATFHCSAGPQDSQTGKFSGLPGDGAIFVEELASPQHLRSILEDDFIELDDLA 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01029 292 Gene3D NAC domain 24 169 IPR036093 GO:0003677|GO:0006355
Accr4g01029 292 SUPERFAMILY NAC domain 11 164 IPR036093 GO:0003677|GO:0006355
Accr4g01029 292 ProSiteProfiles NAC domain profile. 15 164 IPR003441 GO:0003677|GO:0006355
Accr4g01029 292 Pfam No apical meristem (NAM) protein 16 148 IPR003441 GO:0003677|GO:0006355
Accr4g01029 292 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 14 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01029 Accr-Chr4 9770214 9773029 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01029 14 181 NAC Transcription Factor Family AT1G52890 33.708 9.68e-25 99.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Accr4g01029 NAM 1.9e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01029 - - pcin:129295489 445.662