Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01028 ATGGGAAGCATGAAGGTGCATCACTTGGCACGTGCACTCACGTGGGAGAACGAACCCTCCCTCACCCTTGGCTTCAAACGCTTACGCCCTCTCGCCCCTAAGCTCCACACCAACACTCACACTTCTCATTCTCTTTCTTCTTTCGATCTCAACTCCTTCATCAGACCCGATAGTGGCCCCAGAAAGCTCCCTTCCCCTCGCCACCACCCACAACCAGATTCACCACCCCAGGTGGAAACGCATCCGGGAGGAACGAGGTGGAATCCAACGCAGGAACAGATTGGGATACTGGAGATGCTGTACAGAAGTGGAATGCGAACTCCCAATGCTGACCAGATTCAGCAGATCACTGCTCAGCTTGCCAAGTACGGCAAGATCGAAGGCAAGAATGTCTTCTATTGGTTCCAAAACCACAAAGCCCGCGAAAGACAAAAGCTGAAACGCATCCCTAATTCTAGTTCAACTGCTTCTCCTCCTCCTCCACCTACCACTGCCTTCCCTTTAACTTTACAGACAAGGGGTCAAGTAGTTGAAGGAGAGGGAGATAGCCCGTTGAGGAAGAAGTGTAGGAGCTTGGCTTTTGAGTGTTTTCAATTAGAAGAAATCAGATTGTTACGTAGAGATGATGAGCAGGAATATAAAACTCTGGAGCTTTTCCCATTGCACCCGGAAGGCAGATGA 681 0.5007 MGSMKVHHLARALTWENEPSLTLGFKRLRPLAPKLHTNTHTSHSLSSFDLNSFIRPDSGPRKLPSPRHHPQPDSPPQVETHPGGTRWNPTQEQIGILEMLYRSGMRTPNADQIQQITAQLAKYGKIEGKNVFYWFQNHKARERQKLKRIPNSSSTASPPPPPTTAFPLTLQTRGQVVEGEGDSPLRKKCRSLAFECFQLEEIRLLRRDDEQEYKTLELFPLHPEGR 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01028 226 PANTHER WUSCHEL-RELATED HOMEOBOX 4 4 226 IPR044186 GO:0003700|GO:0010067|GO:0010087|GO:0051301
Accr4g01028 226 SUPERFAMILY Homeodomain-like 79 148 IPR009057 -
Accr4g01028 226 CDD homeodomain 85 145 IPR001356 GO:0003677
Accr4g01028 226 FunFam WUSCHEL-related homeobox 4 84 151 - -
Accr4g01028 226 MobiDBLite consensus disorder prediction 38 53 - -
Accr4g01028 226 Gene3D - 84 149 - -
Accr4g01028 226 Pfam Homeodomain 85 144 IPR001356 GO:0003677
Accr4g01028 226 ProSiteProfiles 'Homeobox' domain profile. 80 145 IPR001356 GO:0003677
Accr4g01028 226 SMART HOX_1 82 149 IPR001356 GO:0003677
Accr4g01028 226 MobiDBLite consensus disorder prediction 38 89 - -
Accr4g01028 226 MobiDBLite consensus disorder prediction 145 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01028 Accr-Chr4 9765476 9766599 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01028 4 173 Wox Gene Family AT1G46480 54.891 8.68e-57 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Accr4g01028 Homeodomain 5.4e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01028 - - rcu:8288579 277.715