Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01027 ATGATGAAGAGCAAGGCGGAGAAGCGAAAGCAAGACGATTCGAGACAGAAACCGTACAGAGGGATTAGGATGAGGAAGTGGGGAAAGTGGGTGGCGGAGATTAGAGAACCCAACAAGAGGTCGAGGCTGTGGCTGGGCTCCTACACCACTCCGATGGCCGCCGCTCGCGCTTACGACACAGCCGTTTTCTATCTCAGGGGCCCTTCCGCTCGCCTCAACTTCCCCGACTTGTTATTCCAAGACGACGACGGCGACGTCGTTCAGGGCCACAACATGTCCCCCGATTCCATTCGCAAAAGGGCCACCGAAGTCGGCGCAAGAGTTGACGCCCTCCAAGCCGCTCTTCATCATCACTCCGATTCTCACGCCCAAACCCCTTCCGACAAGCCCGACTTGAATGAGTTCCCCAGACCCGAAGATCTTGTTGATGATTACAATTAG 441 0.5578 MMKSKAEKRKQDDSRQKPYRGIRMRKWGKWVAEIREPNKRSRLWLGSYTTPMAAARAYDTAVFYLRGPSARLNFPDLLFQDDDGDVVQGHNMSPDSIRKRATEVGARVDALQAALHHHSDSHAQTPSDKPDLNEFPRPEDLVDDYN 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01027 146 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 3 141 - -
Accr4g01027 146 SUPERFAMILY DNA-binding domain 18 76 IPR016177 GO:0003677
Accr4g01027 146 Gene3D AP2/ERF domain 17 76 IPR036955 GO:0003700|GO:0006355
Accr4g01027 146 ProSiteProfiles AP2/ERF domain profile. 18 75 IPR001471 GO:0003700|GO:0006355
Accr4g01027 146 SMART rav1_2 18 81 IPR001471 GO:0003700|GO:0006355
Accr4g01027 146 FunFam Ethylene-responsive transcription factor 2 17 76 - -
Accr4g01027 146 MobiDBLite consensus disorder prediction 114 146 - -
Accr4g01027 146 CDD AP2 19 77 IPR001471 GO:0003700|GO:0006355
Accr4g01027 146 Pfam AP2 domain 19 67 IPR001471 GO:0003700|GO:0006355
Accr4g01027 146 PRINTS Ethylene responsive element binding protein signature 57 77 IPR001471 GO:0003700|GO:0006355
Accr4g01027 146 PRINTS Ethylene responsive element binding protein signature 19 30 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01027 Accr-Chr4 9751841 9752281 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01027 15 144 AP2-EREBP Transcription Factor Family AT3G50260 56.835 5.88e-50 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr4g01027 AP2 5.1e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01027 K09286 - gmx:100801528 207.608