Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01026 ATGAACCCTCTATCACTCTGTGACGCAACGGACCCCACCCCTTCACTTTTCCTTCGCAATCTCAGTTCACAGAGGAGCCTCCATTCCTGCTCGTCTCTCTCCTTCAATTTCAGAAATGCAGTGTCACTTGCAATCTCATCAAAATCCACACTTCAAAGTTTGCCTTCTCGCCGATGGCTTACCAGAGCCTGCTCCGCTGCAACTTCTGAAATCGACATGGTTAAGAACAAGGAAGGTATTTACGCCCCCAAACAGAATAAAGTCGTAGTCTTATGGGACCTTGATAACAAACCCCCTCGCGGACCGCCCTACCAGGCAGCCATGGCACTTAAGCAGGTGGCACAGCGCTTCGGTGACGTTGTCGACATGTCTGCCTACGCCAATCGCCACGCATTTATCCACTTACCTCAATGGGTTCTTCACGAACGCCGTGAACGGAAGCAAATAGACATTATGGAGCGTAAAGGAATGATCACGCCTTCTGAGCCGGCCGTTTGTGGGGTTTGCGGCCGCAAGTGTAAAAGTAATTTAGACCTCAAGAAACATTTCAAGCAGCTCCATCAGCGAGAGCGTCAGAAAAAGCTGAATCGGATGAGGTCACTTAAGGGGAAAAAGCGTCAGCGTTATAAAGAGAGGTTCATATCTGGGAATCACAAGTACAATGAGGCAGCAAGATCTTTGATTACCCCTAAGGTGGGATATGGGCTCGCTTCCGAACTAAGGCGTGCCGGAGTATTTGTGAAGACGGTGCAAGATAAACCGCAAGCAGCTGATTGGGCACTGAAGAGGCAGATGCAACACTCAATGAGCCGAGGGATAGATTGGTTGTTTTTGGTGTCCGACGATTCAGATTTTTCGGAGATGTTGAGGAGGGCGAGAGAGGCAAATTTGGGAACGGTAGTTGTGGGTGACTGGGACAGGGCATTAGGACGGCACGCCGACTTATGGGTTCCTTGGATTGAAGTTGAGAATGGTGAGCTTGCAGAGACAGATTTAGTACCCAAGAACAGAAGAAGAGAGTCTTTAGCTGAAGATGATGGTTTCTTTTCAGTATCCCATGACGATGGAGATACTGTTATTACGAGCGATTTGGATGGAATAGTAGATGAGCTTGTTGCAATGAGAACCGAGTTTAATGATCTGAGAAATGCAACATTCTCGGATGAGGATGAGGAACAAGGGTGGGTTTTGGAAGAACTGGATGAAAATTATATGCCAGTGATTGATGAGGATGAGGAAACAGAAGATGAGTTTTTTTGA 1260 0.4746 MNPLSLCDATDPTPSLFLRNLSSQRSLHSCSSLSFNFRNAVSLAISSKSTLQSLPSRRWLTRACSAATSEIDMVKNKEGIYAPKQNKVVVLWDLDNKPPRGPPYQAAMALKQVAQRFGDVVDMSAYANRHAFIHLPQWVLHERRERKQIDIMERKGMITPSEPAVCGVCGRKCKSNLDLKKHFKQLHQRERQKKLNRMRSLKGKKRQRYKERFISGNHKYNEAARSLITPKVGYGLASELRRAGVFVKTVQDKPQAADWALKRQMQHSMSRGIDWLFLVSDDSDFSEMLRRAREANLGTVVVGDWDRALGRHADLWVPWIEVENGELAETDLVPKNRRRESLAEDDGFFSVSHDDGDTVITSDLDGIVDELVAMRTEFNDLRNATFSDEDEEQGWVLEELDENYMPVIDEDEETEDEFF 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01026 419 PANTHER C2H2-TYPE DOMAIN-CONTAINING PROTEIN 52 357 - -
Accr4g01026 419 CDD PIN_LabA-like 174 304 - -
Accr4g01026 419 ProSitePatterns Zinc finger C2H2 type domain signature. 166 187 IPR013087 -
Accr4g01026 419 ProSiteProfiles Zinc finger C2H2 type domain profile. 164 192 IPR013087 -
Accr4g01026 419 Gene3D - 81 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01026 Accr-Chr4 9742447 9743706 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01026 15 367 C2H2 Transcription Factor Family AT5G52010 64.011 8.44e-169 477
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Accr4g01026 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01026 - - qsa:O6P43_016041 600.512