Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01020 ATGCGTAAACAAGATCATTTCTCCCTTCTGCTTCAAGTTCAAAACTTGCTGTTATTTTTGTCTTCTTTCCTGTTATTTATACTCTGCTCCTTTGTTGCTCCTTCTGGGCCTCTCCTGCATCATCCTCCACCTGCATTTCCTCTGCTCTTACCTCCTGATGCTGCTGCATTATTGTCATTCAAATCCAAAGCTGATCTCAACAATCACCTCCTTTTCTCTCCTAACACCTCCGCAGATGCTTTCTGCAAATGGCAAGGTGTTCAATGCAATGCAAAGCTGAAAGCGGAGCGTCTTGTTCTTCAAGGTTTAGATCTCGGAGGTATTTTCGCTCCCAACACATTGTCTCTTCTTGACCAGCTCCGAGTGCTCAGTTTGCAGAACAACTCTCTCGTTGGACCAATCCCTGATCTCTCCAGTCTTCACAACCTCAAGAGCCTCTTCCTCGATAATAACCGCTTCACGGGTTCTTTTCCTCCTTCGATCCTCACACTTCACAGGCTTCGCACGTTAGATTTATCTCACAACAATTTCACAGGGCCCATCCCCATCAACTTAACCAAGCTAGACCATTTCTACTACCTCCGTCTCTGCTGGAATAGATTCAATGGCTCCATCCCTCCTTTCAATCAGTCTGCTCTCCGAACATTCGACGTCTCTGGTAACAACTTTTCCGGTCCTATTCCTGTCACGGTCACTTTAGTCCGCTTTGGACCCTTCCCTTTCTCTCAAAACCCAAGCCTCTGCGGCGAAATCATCCATAAAGAATGCCATCCTAGTGCACCTTTCTTTGCACCATTAGCACCGCTCAAGGCAGCGCCGCCGCCGGTACAGCTTGGTCAGAGCGCCCAGGTCCACGGCGTTGACGGGTTTGGTAGTACACCCAACAAGAAAATACACAACAGGAACGCCGTTATTATTGGGTTCTCCGCAGCGGTTTGCGTTCTCATCACTTCGCTTGTCTGTTTCGTGGTGGCCTTCAGGAGACAGGGAGAGAAGAAGGAGTCTTCGAGGGCTCTAATGGATTCTGATGGGGCGGCAACGGCAGAAGTGGTGGCGGTGATGCAAATGGAGCAAGAGAAGGAATTGGAGGAGAAGGTGAAGAAGGTCCAGGAGATGCAAGTGGGGAAGAGTGGGAGCTTAATGTTCTGTGCGGGAGAGGCGCAGCTTTATACTCTGGACCAGCTAATGAGAGCCTCGGCGGAGCTTTTGGGAAGGGGATCCTTGGGGTCCACGTACAAAGCGGTGTTGGATGACCGTTTGATCGTCACTGTGAAGCGCCTTGATGCAGCTAAAGTGGCTTCAGACTCAACCAAGGAAATCTTTGATAGTCATATGGAATCAGTAGGTGGTCTTCGCCACCCCAATTTGGTTCCGCTTAGGGCCTATTTTCAGGCCAGGGAAGAGAGGCTTCTCATCTATGATTACGAGCCTAATGGCAGTCTTTTCTCCCTCGTACACGGTTCAAGATCAAGCAGGGCCAGGCCATTGCACTGGACATCGTGTTTGAAGATTGCAGAGGACGTAGCACAAGGGCTGTCCTACATTCACCAAGCCTGGAGACTAGTGCATGGCAATCTCAAGTCCTCCAACGTTTTGCTTGGCCCTGATTTTGAAGCCTGTATCACTGATTACTGTCTCTCCACGTTGGTCAACACTTCCAGCTTCAACGACGACCCGGATTCAGCTGCGTATAGGGCACCCGAGACCCGTAATCCGAACCACCAGCCAAGCCCCAAATCTGATGTTTACGCTTATGGTGTTTTGTTGCTGGAACTTCTAACGGGGAAGCCTCCTTCGGAACACCCTTTCTTGGTGCCCACTGATAGGGTGAGTTGGGTGAAATCTGTGCGGGAAGATAATGGAGGCGAAGATAACAGAATGGACATGCTTGTTGAGGTTGCTACCACCTGTAGCTTGACCTCTCCTGAGCAGAGACCCACTATGTGGCAGGTCTTGAAGATGTTGCAGGAAATTAAAGAGATTGTGTTATTGGAGGATAGTGCATTAGACCCACGCACCACCACCTCTTAA 2031 0.4963 MRKQDHFSLLLQVQNLLLFLSSFLLFILCSFVAPSGPLLHHPPPAFPLLLPPDAAALLSFKSKADLNNHLLFSPNTSADAFCKWQGVQCNAKLKAERLVLQGLDLGGIFAPNTLSLLDQLRVLSLQNNSLVGPIPDLSSLHNLKSLFLDNNRFTGSFPPSILTLHRLRTLDLSHNNFTGPIPINLTKLDHFYYLRLCWNRFNGSIPPFNQSALRTFDVSGNNFSGPIPVTVTLVRFGPFPFSQNPSLCGEIIHKECHPSAPFFAPLAPLKAAPPPVQLGQSAQVHGVDGFGSTPNKKIHNRNAVIIGFSAAVCVLITSLVCFVVAFRRQGEKKESSRALMDSDGAATAEVVAVMQMEQEKELEEKVKKVQEMQVGKSGSLMFCAGEAQLYTLDQLMRASAELLGRGSLGSTYKAVLDDRLIVTVKRLDAAKVASDSTKEIFDSHMESVGGLRHPNLVPLRAYFQAREERLLIYDYEPNGSLFSLVHGSRSSRARPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACITDYCLSTLVNTSSFNDDPDSAAYRAPETRNPNHQPSPKSDVYAYGVLLLELLTGKPPSEHPFLVPTDRVSWVKSVREDNGGEDNRMDMLVEVATTCSLTSPEQRPTMWQVLKMLQEIKEIVLLEDSALDPRTTTS 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01020 676 MobiDBLite consensus disorder prediction 560 579 - -
Accr4g01020 676 Gene3D Phosphorylase Kinase; domain 1 364 475 - -
Accr4g01020 676 FunFam Nuclear pore complex protein NUP107 51 207 - -
Accr4g01020 676 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 24 659 IPR046959 -
Accr4g01020 676 Pfam Protein kinase domain 400 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g01020 676 Gene3D Transferase(Phosphotransferase) domain 1 477 667 - -
Accr4g01020 676 Coils Coil 352 372 - -
Accr4g01020 676 Gene3D Ribonuclease Inhibitor 211 258 IPR032675 -
Accr4g01020 676 Gene3D Ribonuclease Inhibitor 52 210 IPR032675 -
Accr4g01020 676 ProSiteProfiles Protein kinase domain profile. 397 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr4g01020 676 SUPERFAMILY Protein kinase-like (PK-like) 401 659 IPR011009 -
Accr4g01020 676 Pfam Leucine rich repeat N-terminal domain 51 90 IPR013210 -
Accr4g01020 676 SUPERFAMILY L domain-like 51 230 - -
Accr4g01020 676 Pfam Leucine Rich Repeat 166 184 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01020 Accr-Chr4 9705672 9708905 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01020 20 669 Receptor kinase-like Gene Family AT5G43020 56.866 0.0 692
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Accr4g01020 Pkinase 2.6e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01020 - - qsa:O6P43_016036 887.1