Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01003 ATGATGAGCACGATCATACTCCGAATCAAGAATGGGGCTGCTGTGCCTTCAACTTCTCCATCTTCCTCATCATCCCCACTATCTCTCCTTCTTCTGCTTCTCCTTCTTCTATCTTCACAGGCTTGCTCCACTTCTGCGTTCTCTCGCTCAGCTGTTACGTTTCTTCCTGGGTTTCAAGGGCCTCTTCCTTTCCATCTTGAAACTGGGTATGTGGGAGTCGGAGAATCAGAGGGTGTTCAGCTCTTCTACTACTTCCTCAAGTCAGACCGAAATCCCAAACAAGACCCTCTCATGCTCTGGCTAACTGGGGGCCCTGGTTGCTCTGCTTTGTCTTCCTTTCTCTTTGAAATAGGTCCACTTCGTTTTCGGATGGAGGAATATAATGGTACTCTGCCTACCCTTGTTTTGAATCCGGACTCATGGACTAAGGTTTCCAGCATCATTTTCTTAGACTTGCCTGCTCTTACTGGATTCTCCTATACAACACTCCCTGTTGCTCCTCAGCGAAGTGACTCTAAACAAATCCAACATGCCGTTCAATTTTTGAGGAAGTGGTTGACTGGTCACTCGGAATTCCAATCGAACCAAATATACATAGGCGGGGACTCATATTCTGGATTGATTGTCCCTGCAATTGCCCTTGAAATCTCGAAAGGAAATGAGAAAAGTATAGAGCCATCGATTAATTTCCAGGGATGCTTGCTAGGAAACCCCTTAACAGATGATTATATAGATAACAACCATAGGATCCCATTTGCTCATGGTATGGGGCTTATTTCTGATGAACTCTATGAGTCATTGAAAAGCAGTTGTGGGGGAGAATATCACAATGTAGATAATATGAATGAAGCGTGTGCCGGATATATTGTAGAATATGGAAAGTGTGTTTCAGGAATAAATTATGCACAAATTTTAGAACCCGAATGTCTCTTTGCCTCCCCAAAACCACAAAAGTTCTCTGACAGAAGATCTCTCAATGAGATGCCCGAAACCTTACTCCCCTCGGACTCTCAACCGCCACTTCCTACTATAACATGTCGAACTTACGAAGGTTTGCTAGCTCTGTATTGGGCGAATGATGGTTCTGTTCGCAAGGCCCTTGGCATACGTCAGGGGACCATAGGGACATGGATGCCATGTATTTTGACACCTTATACTAAAGAAATTAAAAGCAGTGTTACATTTCATATGAACCTGAGTGCTAAAGGTTACCGTGAGCTCATATATAGTGGAGATCATGACTTAATTGTCCCGTTTCAAGGAACTGAAGCATGGATAAAATCTTTAAATTACTCCATTGTAGATGAATGGAGACCATGGTTAGTCCAAGGCCAAGTTGCAGGATACACAAGGACATATTCAAATGGGATGACATACGCGACTGTTAAGGGTGGAGGGCACACAGCTCCCGAGTACAAACCTAAAGAATGCTTTGCAATGTTTAAGAGGTGGATTTCTCAAAACCCATTGTAA 1473 0.4358 MMSTIILRIKNGAAVPSTSPSSSSSPLSLLLLLLLLLSSQACSTSAFSRSAVTFLPGFQGPLPFHLETGYVGVGESEGVQLFYYFLKSDRNPKQDPLMLWLTGGPGCSALSSFLFEIGPLRFRMEEYNGTLPTLVLNPDSWTKVSSIIFLDLPALTGFSYTTLPVAPQRSDSKQIQHAVQFLRKWLTGHSEFQSNQIYIGGDSYSGLIVPAIALEISKGNEKSIEPSINFQGCLLGNPLTDDYIDNNHRIPFAHGMGLISDELYESLKSSCGGEYHNVDNMNEACAGYIVEYGKCVSGINYAQILEPECLFASPKPQKFSDRRSLNEMPETLLPSDSQPPLPTITCRTYEGLLALYWANDGSVRKALGIRQGTIGTWMPCILTPYTKEIKSSVTFHMNLSAKGYRELIYSGDHDLIVPFQGTEAWIKSLNYSIVDEWRPWLVQGQVAGYTRTYSNGMTYATVKGGGHTAPEYKPKECFAMFKRWISQNPL 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01003 490 Gene3D alpha/beta hydrolase 46 316 IPR029058 -
Accr4g01003 490 FunFam Serine carboxypeptidase-like 11 46 490 - -
Accr4g01003 490 SUPERFAMILY alpha/beta-Hydrolases 52 488 IPR029058 -
Accr4g01003 490 PRINTS Carboxypeptidase C serine protease (S10) family signature 150 160 IPR001563 GO:0004185|GO:0006508
Accr4g01003 490 PRINTS Carboxypeptidase C serine protease (S10) family signature 185 210 IPR001563 GO:0004185|GO:0006508
Accr4g01003 490 PRINTS Carboxypeptidase C serine protease (S10) family signature 457 470 IPR001563 GO:0004185|GO:0006508
Accr4g01003 490 PRINTS Carboxypeptidase C serine protease (S10) family signature 137 149 IPR001563 GO:0004185|GO:0006508
Accr4g01003 490 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 50 474 IPR001563 GO:0004185|GO:0006508
Accr4g01003 490 Pfam Serine carboxypeptidase 56 487 IPR001563 GO:0004185|GO:0006508
Accr4g01003 490 FunFam Carboxypeptidase 345 489 - -
Accr4g01003 490 FunFam Carboxypeptidase 393 487 - -
Accr4g01003 490 Gene3D - 347 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01003 Accr-Chr4 9561596 9564385 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01003 46 75 Calmodulin-binding Proteins AT2G22960 66.667 1.83e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01003 K16296 - qsu:111997462 597.43