Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01002 ATGATGAGCACGATCACACTCCGAATCAAGAATGGGGCTGCAGCGCCTTCAACTTCTCCATCTTCTTCATCATCCCCACTATCTCTGCTGCTTCTTCTTCTTCTATCTTCACAGGCTTGCTCCACTTGTGTGTTCTCTCGCTCAGCTGTTACGTTTCTTCCTGGCTTTCAAGGGCCTCTTCCTTTTCATCTTGAAACTGGGTATGTGGGAGTCGGAGAATCGGAGGGTGTGCAGCTCTTCTACTACTTCCTCAAGTCAGACCGAAATCCCAAACAAGACCCTCTCATGCTCTGGCTAACCGGGGGCCATGGTTGCTCTGCTTTATCATCTCTTCTCTTTGAAATAGGTCCGCTTCGTTTTCGGATGGAGGAATATAATGGTACTCTGCCTACCCTTGTTTTGAATCCGGACTCATGGACTAAGATTTCCAGCATAATTTTCTTAGACTTGCCTGCTCTTACTGGATTCTCCTATACAACACTCCCTGTTGCACCTCAGCGAAGTGACTCTAAACAAATCCAACATGCCGTTCAATTTTTGAGGAAGTGGTTGACTGATCACCCAGAATTCCAATCGAACCAAATATACATAGGCGGGGACTCATATTCTGGATTGATTGTCCCTGCAGTTGCCCTTGAAATCTCGAAAGGAAATGAGAAAAGTATGGAGCCATCGATTAATCTTCAGGGATGCTTGTTAGGAAACCCCTCAACAGATGATGTTATAGATAACAAATATAAGATCCCATTTGCTCATGGTATGGGGCTTATTTCTGATGAACTCTATGAGTCATTGAAAAGCAGTTGTGGGGGAGAATATCGCAATGTCGATAATATGAATGAAGCGTGTGCCGGATATATTGCAGAATATGGAAAGTGTGTTTCAGGAATAAATTATGCACATATTTTGGAACCCGAATGTGCCTTTGCTTCCCCAAAACCACAAAAGTTCTCTGACAGAAGATCTCTCAATGAGATGCCTGAAACCTTACTCCCCTCAGACTCTCAACCCCCACTTCCTACTATAACATGTCGAACTTACGAAGGTTTGCTAGCTCAGTATTGGGCGAATGATGGTTCTGTTCGAAAGGCCCTTGGCATCCGTCAGGGGACCATAGGGAAATGGGTGCGATGTATTGGGATACCTTATACTGAAGAAATTAAAAGTAGTGTTCCATTTCATATGAACTTGAGTGCTAAAGGTTACCGTGAGCTCATATATAGTGGAGATCATGACTTACTTGTCCCGTTTCGAGGAACTGAAGCATGGATAAAATCTTTAAATTACTCCATTGTAGATGAATGGAGGCCATGGTTAATTCAAGGCCAAGTCGCTGGATACACAAGGACATATTCAAATGGGATGACGTTCGCAACTGTTAAGGGTGGAGGGCACACAGCTCCCGAGTACAAACCTAAAGAATGCTTTGCAATGTTTGAGAGGTGGATTTCTCAAAACCCATTGTAA 1467 0.4383 MMSTITLRIKNGAAAPSTSPSSSSSPLSLLLLLLLSSQACSTCVFSRSAVTFLPGFQGPLPFHLETGYVGVGESEGVQLFYYFLKSDRNPKQDPLMLWLTGGHGCSALSSLLFEIGPLRFRMEEYNGTLPTLVLNPDSWTKISSIIFLDLPALTGFSYTTLPVAPQRSDSKQIQHAVQFLRKWLTDHPEFQSNQIYIGGDSYSGLIVPAVALEISKGNEKSMEPSINLQGCLLGNPSTDDVIDNKYKIPFAHGMGLISDELYESLKSSCGGEYRNVDNMNEACAGYIAEYGKCVSGINYAHILEPECAFASPKPQKFSDRRSLNEMPETLLPSDSQPPLPTITCRTYEGLLAQYWANDGSVRKALGIRQGTIGKWVRCIGIPYTEEIKSSVPFHMNLSAKGYRELIYSGDHDLLVPFRGTEAWIKSLNYSIVDEWRPWLIQGQVAGYTRTYSNGMTFATVKGGGHTAPEYKPKECFAMFERWISQNPL 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01002 488 FunFam Serine carboxypeptidase-like 11 44 488 - -
Accr4g01002 488 FunFam Carboxypeptidase 390 485 - -
Accr4g01002 488 PRINTS Carboxypeptidase C serine protease (S10) family signature 183 208 IPR001563 GO:0004185|GO:0006508
Accr4g01002 488 PRINTS Carboxypeptidase C serine protease (S10) family signature 148 158 IPR001563 GO:0004185|GO:0006508
Accr4g01002 488 PRINTS Carboxypeptidase C serine protease (S10) family signature 135 147 IPR001563 GO:0004185|GO:0006508
Accr4g01002 488 PRINTS Carboxypeptidase C serine protease (S10) family signature 455 468 IPR001563 GO:0004185|GO:0006508
Accr4g01002 488 Gene3D alpha/beta hydrolase 45 315 IPR029058 -
Accr4g01002 488 Pfam Serine carboxypeptidase 54 485 IPR001563 GO:0004185|GO:0006508
Accr4g01002 488 Gene3D - 344 488 - -
Accr4g01002 488 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 48 472 IPR001563 GO:0004185|GO:0006508
Accr4g01002 488 SUPERFAMILY alpha/beta-Hydrolases 50 486 IPR029058 -
Accr4g01002 488 FunFam Carboxypeptidase 343 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01002 Accr-Chr4 9545635 9548408 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01002 46 73 Calmodulin-binding Proteins AT2G22960 67.857 2.28e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01002 K16296 - qsa:O6P43_019030 615.92