Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01001 ATGAATATGGCTGCTGCGCCTTCAACTTCTCCATCTTCCTCATCATCCCCACTATCTCTGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTATCTTCACAGGTTTGCTCCACTTCTGCGTTCTCTCGCTCAGCTGTTACGTTTCTTCCTGGGTTTCAAGGGCCTCTTCCTTTCCATCTTGAAACTGGGTATGTGGGAGTGGGAGAATCAGAGGGTGTGCAGCTCTTCTACTACTTCCTCAAGTCAGACCGAAATCCCAAACAAGACCCTCTCATGCTCTGGCTAACTGGGGGCCATGGTTGCTCTGCTTTATCAGCTCTTCTCTTTGAAATAGGTCCACTTCGTTTTCGGATGGAGGAATATAATGGTACTCTGCCTACCCTTGTTTTGAATCCGGACTCATGGACTAAGGTTTCCAGCATCATTTTCTTAGACTTGCCTGCTCTTACTGGATTCTCCTATACAACACTCCCTGTTGCTCCTCAGCGAAGTGACTCTAAACAAGTCCAACATGCCATTCAATTTTTGAGGAAGTGGTTGACTGGTCACCCGGAATTCCAATCGAACCAAATATACATAGGCGGAGACTCATATTCTGGATTGATCGTCCCTGCAGTTGCCCTTGAAATCTCAAAAGGAAATGAGAACAACATAGAGCCATCGATTAATCTCCAGGGATGCTTGTTAGGAAACCCCTCAACAGACGATGGTATAGATAACAACTATAAGATCCCATTTGCTCATGGTATGGGGCTTATTTCTGATGAACTCTATGAGTCATTGAAAAGCAGTTGTGGGGGAGAATATCACAATGTAGATACTATGAATGAAGTGTGTGCTGAATATATTGCAGAATATGGAAAGTGTGTTTCAGGAATAAATTTTGCACATATTTTGGAACCTGAATGTCCCTTTGCTTCCCCAAAACCGCAAAAGTTCTATGACAGAAGATCTCTCAATGAGATGCCGGAAACCTTACTCCCCTCACACTCTCAACCGCCACTTCCTACTATAACATGTCGAACTTACGCAGGTTTGCTAGCTCAGTATTGGGCGAATGATGGTTCTGTTCGCAAGGCCCTTGGCATCCGTCAGGGGACCATAGGGAAATGGGTGCGATGTATTTGGATACCTTATACAGAAGAAATTAAAAGTAGTGTTCCATTTCATATGAACTTGAGTGCTAAAGGTTACCGTGAGCTCATATATAGTGGAGATCATGACTTAGTTGTCCCGTTTCGAGGAACTGAAGCATGGATAAGATCTTTAAATTACTCCATTGTAAATGAATGGAGGCCATGGTTAGTCCAAGGCCAAGTTGCTGGATACACAAGGACATATTCAAATGGGATGACGTACGCGACTGTTAAGGGTGGAGGGCACACAGCTCCCGAGTACAAACCTAAAGAATGCTTTGCAATGTTTGAGAGGTGGATTTCTCAAAACCCATTGTAA 1452 0.4387 MNMAAAPSTSPSSSSSPLSLLLLLLLLLLLSSQVCSTSAFSRSAVTFLPGFQGPLPFHLETGYVGVGESEGVQLFYYFLKSDRNPKQDPLMLWLTGGHGCSALSALLFEIGPLRFRMEEYNGTLPTLVLNPDSWTKVSSIIFLDLPALTGFSYTTLPVAPQRSDSKQVQHAIQFLRKWLTGHPEFQSNQIYIGGDSYSGLIVPAVALEISKGNENNIEPSINLQGCLLGNPSTDDGIDNNYKIPFAHGMGLISDELYESLKSSCGGEYHNVDTMNEVCAEYIAEYGKCVSGINFAHILEPECPFASPKPQKFYDRRSLNEMPETLLPSHSQPPLPTITCRTYAGLLAQYWANDGSVRKALGIRQGTIGKWVRCIWIPYTEEIKSSVPFHMNLSAKGYRELIYSGDHDLVVPFRGTEAWIRSLNYSIVNEWRPWLVQGQVAGYTRTYSNGMTYATVKGGGHTAPEYKPKECFAMFERWISQNPL 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01001 483 PRINTS Carboxypeptidase C serine protease (S10) family signature 143 153 IPR001563 GO:0004185|GO:0006508
Accr4g01001 483 PRINTS Carboxypeptidase C serine protease (S10) family signature 130 142 IPR001563 GO:0004185|GO:0006508
Accr4g01001 483 PRINTS Carboxypeptidase C serine protease (S10) family signature 178 203 IPR001563 GO:0004185|GO:0006508
Accr4g01001 483 PRINTS Carboxypeptidase C serine protease (S10) family signature 450 463 IPR001563 GO:0004185|GO:0006508
Accr4g01001 483 Pfam Serine carboxypeptidase 49 480 IPR001563 GO:0004185|GO:0006508
Accr4g01001 483 SUPERFAMILY alpha/beta-Hydrolases 45 481 IPR029058 -
Accr4g01001 483 Gene3D - 339 483 - -
Accr4g01001 483 Gene3D alpha/beta hydrolase 39 310 IPR029058 -
Accr4g01001 483 FunFam Serine carboxypeptidase-like 11 39 483 - -
Accr4g01001 483 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 43 467 IPR001563 GO:0004185|GO:0006508
Accr4g01001 483 FunFam Carboxypeptidase 338 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01001 Accr-Chr4 9528940 9531708 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01001 39 68 Calmodulin-binding Proteins AT2G22960 66.667 1.79e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01001 K16296 - qsa:O6P43_019030 619.002