Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00998 ATGTCCGATCAAGAGAATCGCGGGAGGGCCACTCGAGCGGCCAAGAAGAGGGCCGCCGCCGCCATTGCCGAACAATTTCATGTTCCTACCAAGAAGCGCGTGGTGTTGGGAGAGCTCACCAACTTGTCAAATGTCGTCGTGCCTGAGAAACCATGCCCTGGGGAAGAGTTTCGGAAGGAGAAAAGTAGCAGAGTTGCGAGGAAACTCAGAAAAGTGCTACCCACAATCGCGACGCCCCCATCCAACCTCATTAGTGCTGATGACCCTCAATTGGTTTTGCCTTATGTTTCTGATATTTATGAGTATCTTCTAAAATTGGAGGCGAATCCCAGAAGAAGACCGTTACCTGATTACATAAAAAAAGTTCAGAGGGATATTAATCCTCATATGAGAGGCGTTCTGGTAGATTGGTTGGTGGAAGTTGCGGAGGAATACAATCTTGTTTCTGACACCCTTTATCTCACCGTTGCTTATATCGACAAATATCTATCCTTAAATGCTCTCAGTAGGCACAAGCTGCAGTTACTGGGTGTTTCTTCAATGCTAATTGCCTCTAAATATGAGGAGATCAAGCCTCCTGAGGTGGAAGAGTTTTGTTACATCACGGACAACACATACACCAAGGAAGAGGTTGTGACCATGGAAGCTGAAATACTCAAGTCTTTGAAATATGAAATGGGATACCCTACAGTAAAGACATTTCTAAGAAGATTCTGTACAGTTGCTCTGGAGAATTATGAGGCTTCTGAACTCCAGTTTGAATTCCTTACTTACTATCTTGCGGAGCTCAGTTTGTTGGAGTATAGTTGTGTAAAGTTCTTGCCTTCTTTGGTGGCCGCCTCTGTCATATTTCTTGCTAGATTTATGTTAAGCCCAAAGACTCATCCTTGGAACTCCGCACTCCATCGACGCTCAGGGTATAAATCATCGGACTTGAAGGACTGTGTACTGGTCATTCTTGACTTGTATCTCAGCAGAAGAGGCGGGTCTTTGCCAGCTGTAAGAGATAAATATAAACAGCATAAGTTCAAATGTGTTGCAACAACGCCTTCTCCTCCTGAGATACCTCTTTGTTATTTTGAAGTTACAGAGACAGATCATTAG 1104 0.442 MSDQENRGRATRAAKKRAAAAIAEQFHVPTKKRVVLGELTNLSNVVVPEKPCPGEEFRKEKSSRVARKLRKVLPTIATPPSNLISADDPQLVLPYVSDIYEYLLKLEANPRRRPLPDYIKKVQRDINPHMRGVLVDWLVEVAEEYNLVSDTLYLTVAYIDKYLSLNALSRHKLQLLGVSSMLIASKYEEIKPPEVEEFCYITDNTYTKEEVVTMEAEILKSLKYEMGYPTVKTFLRRFCTVALENYEASELQFEFLTYYLAELSLLEYSCVKFLPSLVAASVIFLARFMLSPKTHPWNSALHRRSGYKSSDLKDCVLVILDLYLSRRGGSLPAVRDKYKQHKFKCVATTPSPPEIPLCYFEVTETDH 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00998 367 SMART Cyclin_C_2 229 352 IPR004367 -
Accr4g00998 367 SMART cyclin_7 136 220 IPR013763 -
Accr4g00998 367 SMART cyclin_7 233 321 IPR013763 -
Accr4g00998 367 Gene3D - 98 348 - -
Accr4g00998 367 SUPERFAMILY Cyclin-like 228 354 IPR036915 -
Accr4g00998 367 FunFam Cyclin A1 216 348 - -
Accr4g00998 367 Pfam Cyclin, N-terminal domain 98 226 IPR006671 -
Accr4g00998 367 CDD CYCLIN_AtCycA-like_rpt2 229 343 - -
Accr4g00998 367 FunFam Mitotic cyclin 6 114 214 - -
Accr4g00998 367 SUPERFAMILY Cyclin-like 87 226 IPR036915 -
Accr4g00998 367 Gene3D - 112 227 - -
Accr4g00998 367 ProSitePatterns Cyclins signature. 131 162 IPR006671 -
Accr4g00998 367 PANTHER CYCLINS 68 346 IPR039361 -
Accr4g00998 367 Pfam Cyclin, C-terminal domain 229 351 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00998 Accr-Chr4 9511077 9513328 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00998 1 361 Core Cell Cycle Gene Families AT1G47230 57.808 1.06e-150 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00998 K06627 - cave:132183787 465.307