Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00997 ATGGAGACTCGCGCCTCGAAGAGAAGAGCAGGGGCCAACGCCTTAGCCCAGAATCGATCACCTAAAAGGAAGCGTGTGGTCTTGGGGGAGCTTCCCAATTTATCCAATCTTGTTGATCCTGCATACTCGAATCCGGGGTTGGAGCCACAGAAACCGAAATATCGAAGGAATACGAGGGCCAAGAAGGCCGCTGCGACCAAGAGTAGCTTCTCTTTGGCGGATCCCAAGTCGGATGAGGCCAAGGCAATTCGCACTGATGCAAAGTCAGGCATTGATGCGAATTCGGAAGATTTGCAAGATAGCCAGCCTTATGTTTCAGATATTTATAAGTATCTCTACAAAATGGAGGCGGAGTCAAAGAGAAAACCAAAGCCCGATTACATAGAGACAGTTCAGAAAGATGTTACTGCCAACATGAGGGGAATACTGGTTGATTGGCTAGTAGAAGTTGCAGAGGAGTATAAGCTTCTCTCTGACACCCTTTACCTCGCCGTTTCATACATTGATCGATTCCTCTCTACCAACCAAGTCACAAGGCAGAGGCTTCAGCTGCTGGGTGTTTCATCTATGTTCATTGCATCGAAGTATGAAGAAATTAGCCCTCCGCATGTGGAAGAGTTTTGTTACATCACTGATAATACATACAGGAAGGCAGAGGTTGTGGAAATGGAGGCTGCTATACTCAAGTCTCTGAATTTTGAAATGGGTAGCCCCACTGTGAAGACGTTTTTGAGGAAGTTTACTGGTATTACATCCGGAAATCAGAAAACCCCAAATCTGCAGTTTGAGTTCGTTTGCTGCTATCTTGCCGAGCTAAGTCTGTTGGATTACAATTGTATTAAATTTTTACCTTCTCTGGTGGCTGCTTCAGTCATATTTCTGGCTAACTTTACCATCCGGCCTAAAGTTCATCCCTGGAATTCAGCCCTGCAAAAATGCACGGGATATAAACCTGCTGAGTTGAAGGATTGTGTGCTTATCTTACACGACTTGTACTTGGCAAGAAGGGGAGGATCTTTGCTAGCTATACGGGAGAAATACAAGCAGCACAAGTTCAAATACGTGGCGATGCTGCCTTCTTCTCCGGAGATTCCAATTTCTCACTTTGAAGAAGCATAA 1119 0.4531 METRASKRRAGANALAQNRSPKRKRVVLGELPNLSNLVDPAYSNPGLEPQKPKYRRNTRAKKAAATKSSFSLADPKSDEAKAIRTDAKSGIDANSEDLQDSQPYVSDIYKYLYKMEAESKRKPKPDYIETVQKDVTANMRGILVDWLVEVAEEYKLLSDTLYLAVSYIDRFLSTNQVTRQRLQLLGVSSMFIASKYEEISPPHVEEFCYITDNTYRKAEVVEMEAAILKSLNFEMGSPTVKTFLRKFTGITSGNQKTPNLQFEFVCCYLAELSLLDYNCIKFLPSLVAASVIFLANFTIRPKVHPWNSALQKCTGYKPAELKDCVLILHDLYLARRGGSLLAIREKYKQHKFKYVAMLPSSPEIPISHFEEA 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00997 372 Pfam Cyclin, C-terminal domain 238 360 IPR004367 -
Accr4g00997 372 SMART Cyclin_C_2 238 361 IPR004367 -
Accr4g00997 372 Pfam Cyclin, N-terminal domain 107 235 IPR006671 -
Accr4g00997 372 PIRSF Cyclin_A_B_D_E 2 370 IPR046965 GO:0016538|GO:0044772
Accr4g00997 372 SUPERFAMILY Cyclin-like 238 361 IPR036915 -
Accr4g00997 372 FunFam Cyclin A1 225 357 - -
Accr4g00997 372 SUPERFAMILY Cyclin-like 97 235 IPR036915 -
Accr4g00997 372 ProSitePatterns Cyclins signature. 140 171 IPR006671 -
Accr4g00997 372 MobiDBLite consensus disorder prediction 1 58 - -
Accr4g00997 372 FunFam Mitotic cyclin 6 123 223 - -
Accr4g00997 372 Gene3D - 123 236 - -
Accr4g00997 372 PANTHER CYCLINS 86 349 IPR039361 -
Accr4g00997 372 CDD CYCLIN_AtCycA-like_rpt2 238 352 - -
Accr4g00997 372 Gene3D - 107 357 - -
Accr4g00997 372 SMART cyclin_7 242 330 IPR013763 -
Accr4g00997 372 SMART cyclin_7 145 229 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00997 Accr-Chr4 9503390 9505329 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00997 3 372 Core Cell Cycle Gene Families AT1G47210 55.795 1.76e-145 415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00997 K06627 - qsa:O6P43_016015 469.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr4g00997 4 9503390 9505329 Accr4g00997 4 9503390 9505329 ECH