Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00989 ATGAGCTGCAACGGTTGTCGAGTCCTCCGAAAGGGATGTAGCCAAGACTGCGCTCTCAAGGCTTGCCTCCTGGGGATCCCTTCACCTCACTCCCAGGCCCAAGCCACTCTCTTCCTCGCCAAATTCTTCGGCCGCACCGACCTCATCTCCTTCATTTCTTCCGTTCCCCTCTCCACTAGACCAGCCTTGTTTCGGTCTCTGCTGTACGAAGCGTGCGGGCGAATAGTGAATCCCGTGAGCGGCGCCGTCGGACTCCTGTGGAGTGGTAACTGGCACTTATGCGAGGCAGCCGTGCAGACAATACTCGCCGGCGGTGTTCTTCAGCCGCTACCGGAGACTTCCTATGGACTTCTGCAGCCGATCATGGACGAGTCATCTCCTGACATTGGGAAAAATGTGCGCTCTCGGTTCCGGCCATTCATGCATGAATTCGGAGAGAAGGAGCATATGTCAGGCTTGGATCTCTGCTTGCTTCCCGGGACAGGGAGGAGGCAGAGTAATCCGTTGGTTTCTGGTGAGTCGGAAATGAGAAGCTGTGGCGGTAGCGGAGCGGAGAAGAATATTAAGCTTTTGAACCTGTTTGGGTAA 588 0.5561 MSCNGCRVLRKGCSQDCALKACLLGIPSPHSQAQATLFLAKFFGRTDLISFISSVPLSTRPALFRSLLYEACGRIVNPVSGAVGLLWSGNWHLCEAAVQTILAGGVLQPLPETSYGLLQPIMDESSPDIGKNVRSRFRPFMHEFGEKEHMSGLDLCLLPGTGRRQSNPLVSGESEMRSCGGSGAEKNIKLLNLFG 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00989 195 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Accr4g00989 195 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 125 - -
Accr4g00989 195 Pfam Lateral organ boundaries (LOB) domain 2 100 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00989 Accr-Chr4 9396799 9397459 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00989 1 126 AS2 family AT3G49940 62.595 3.88e-54 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Accr4g00989 LOB 2.7e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00989 - - pop:7488873 205.297