Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00979 ATGGCTCCCAATGAGCAAGACCCTACGCTTCTCAGTCTTGAGTCAGCATGCTCCGATTTGAAAGCTCTCCTTCTAGCTTCCAAGAAACTAGAAGATTGCCTTGGAAATATGGACACAAAGTTCGATGGTATAGAAGCAACTCTGTCCACTTCTTCCAGAAGAGTGGCCCCTTTACAGTCTCTGGCCATGTCCACCAAGGCCCTCGATACCAGAATCAATAGAGCTGTTTCCCCTGCACTTGCACTCCTCGACCGCTTCAAGTTCTACGAGTCCCTCCAACAGAAGCTTCTAGATCTCTCATCCAAACTCTCCCAGGAGAAGACACCCCAAAAACGCCTCCAAAATCTTATCGATTACATAAACTGTGTTGATCAGCTTAATGAGGCTATCATCTCCATAAACCAAGAGGGTGAACCGGTCATTCAGAGGCTTCAAGAGGTGGTTGAGTTTATAAGCCGAACAAAGGCGGCGGATCAATACAGGACAGAGAGGTTAAGAGAGACTCTGATCACTCTTAAGACACTCTACGAGACAGAGGTCGATGCCATGAGGTTTGAAGGTTTACTGGACCAGGCGTTACTTCATATGCAAGATGAATTCGAGAGCATATTGCTGCAAATAAAGCATCAGAAAGTCGGAGATTTGTCACAACAGCAGGCAGAATATGACACCGTCGTTGACTCTGACTTAGGCTCAGAGATGGAAATTGAAGTGCTGAGACGAATTTCAGATACTTTAGCGGCCAATGATTGCTTGGATATATGCATCGACATCTACGTCAAGGTGAGATATAGAAGGGCAGCCAAGGCATTAATGAGGCTAAACCCAGATTACTTGAGAACATATACTCCAGAAGGAATTGATGAAATGGAATGGGAGAGCTTAGAAACGGCAATAACCCTTTGGATCCAACACTTTGAAGTTGCTGTGAAGAAAGTTCTCTTCTCTGAGAAGAAGCTCAGCTACAGAGTTTTGGGTAAGGTCATGGCTGGATTAGTATGGCCTGAATGCTTCGCCAAAATAGCTGACAAAATATTGGCCGTGTTCTTTCGATTCGGAGAAGGTGTAGCCAGAAGCAGTAAAGAGCCACAGAAGTTGTTCAAGCTCTTGGATATGTTTGAGACCTTAGAAAAACTCAAACCTGAATTTTCGGAAATTTTTGACGGCGAAGCTGGAGTAGATTTCTGTACTCGGTTCAGAGAGCTCGAGAAGCTTATAATCGACGCGTCAAGCAAAGTATTTTGGGAATTTGGGCTGCAAATTGAAGGGAACACAGATGGTATTCCACCTCCACAAGATGGTTCTGTTCCCAAACTAGTAAGGTATGCCATTAATTACCTGAAATACCTTGCTACCAAGAATTACAGAGAAGCCATGGGAAATGTTCTCGAAACAGAGCAGATATGGAAAGCTGGGATCTTATCAAAACCCGACAATGGCGAGGATTTACTTAAGGAAGCCATTTTCAACATCATGGATGCCCTTCAAAGAAACATAGAGTCTAAACGCTCTCGTTGCAGGGACAAAACTTTGGTCAATATATTCGCAATGAATACGTACTGGTACATATATATGAGGACCAAAAACTCAGAGCTTGGTGAGCTATTGGGTGATCAATATATGAAAAGGAAGTACAAATCCGTGGCAGAGGAATCAGCCTACATGTATCAGATGCAAGCATGGGGAGTTCTGGTAAGCATCTTGGATATGGAGGAAGTGAAGACACAGGAGAAGGACGTCATTGGAGGTATAGTGACAGAAAAAATTGAAACCTTTCTGAAGTACGTGAATGATACTTGTCAGAAGCACAAAGAGTATTACAACATACCAGACGAAGATTTGAGGGAGCAAATAAAAGAAGCCAGCTTGAAGCTTGTGGTAGAAGCTTACACAGAGTTTTTGGATTCCTACTCAGGATTATTACAAAGGAAATTGTATCCGACTCCTGAGAGGTTGCTGGGTTTGGTGGGTAGGGCTTTTCATGGTGGTGATGTGACGCTGAAGCGACGGACTTTGACAGATCGAATGGCCGGCCGTCTTGCTACGTCTTTGGAGGGAGGGATAAATGATTTTCAACGATCTAGATCAGAGAGTTTCGATGTTTGA 2106 0.4383 MAPNEQDPTLLSLESACSDLKALLLASKKLEDCLGNMDTKFDGIEATLSTSSRRVAPLQSLAMSTKALDTRINRAVSPALALLDRFKFYESLQQKLLDLSSKLSQEKTPQKRLQNLIDYINCVDQLNEAIISINQEGEPVIQRLQEVVEFISRTKAADQYRTERLRETLITLKTLYETEVDAMRFEGLLDQALLHMQDEFESILLQIKHQKVGDLSQQQAEYDTVVDSDLGSEMEIEVLRRISDTLAANDCLDICIDIYVKVRYRRAAKALMRLNPDYLRTYTPEGIDEMEWESLETAITLWIQHFEVAVKKVLFSEKKLSYRVLGKVMAGLVWPECFAKIADKILAVFFRFGEGVARSSKEPQKLFKLLDMFETLEKLKPEFSEIFDGEAGVDFCTRFRELEKLIIDASSKVFWEFGLQIEGNTDGIPPPQDGSVPKLVRYAINYLKYLATKNYREAMGNVLETEQIWKAGILSKPDNGEDLLKEAIFNIMDALQRNIESKRSRCRDKTLVNIFAMNTYWYIYMRTKNSELGELLGDQYMKRKYKSVAEESAYMYQMQAWGVLVSILDMEEVKTQEKDVIGGIVTEKIETFLKYVNDTCQKHKEYYNIPDEDLREQIKEASLKLVVEAYTEFLDSYSGLLQRKLYPTPERLLGLVGRAFHGGDVTLKRRTLTDRMAGRLATSLEGGINDFQRSRSESFDV 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00979 701 Gene3D Exocyst complex component Exo70 153 670 - -
Accr4g00979 701 PANTHER EXOCYST COMPLEX PROTEIN EXO70 81 639 IPR004140 GO:0000145|GO:0006887
Accr4g00979 701 Pfam Exo70 exocyst complex subunit 302 641 IPR046364 GO:0000145|GO:0005546|GO:0006887
Accr4g00979 701 SUPERFAMILY Cullin repeat-like 113 641 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00979 Accr-Chr4 9298822 9301013 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00979 7 643 EXO70 exocyst subunit family AT4G31540 29.376 7.99e-75 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00979 - - qsa:O6P43_019023 982.63