Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00972 ATGGTGGCTGAGAAAGCCTCAGACATGTCAGACTTTGAGAACGAGGATGACCTTGACGAAGAACCCGGAGAAGTGATCGAATCGGCGCCTCCGCAAAAGGTTGGTGAAGAGAGGGAACTCAACTCCCAGCTCAAGAAGAAGCTCCTCAAGCCCGGGCATGGATGGGAGACCCCTGAGTTCAATGACGAAGTAACTGTTCACTATGTGGGGATTTTGCTTGATGGGACAAAGTTCGATTCCACTAGAGATAGGGGTGAACCTGTTACATTTACAGTCGGTCAAGCTGAAGTGGCTGCTGGGTTAGATCGCGGGATTGTCACCATGAAAATGGGGGAGGTTGCATTATTCACATTTCCTACTGACTCAGGCGATGAAGTTGTGAATTCTGGGAATATTCCATCCAACTCGGTCGTCCAGTTTGAGGTTGAACTCATTTCGTGGATCAAAGTGGTGGATGTTTGCAAAAATGGTGGGATTATCAAGAAAATTATGGAGAAGGGAAACAGGAATGAGCGACCCAGTGATCTGGATGAAGTTCTAGTGAAGTACAAGGCGACGCTAGTTGACGGCACTACCGTTGCAGAGACATCAGAAGAGGGTTTTGAATTCCATGTGAAAGATGGTCATCTATTTCCAGGATTACCAAAAGTAATTATGACCATGGGGAGGGGAGAGAAAGCTAAGTTAATTGTCCAACCTCAGTATGCCTTTGGAGAGAAGGAGGGAGAAGCAGAAAGCAGGGTCCATTCAATCCCACCAAATTCAGAATTGCATGTCGATGTTGAATTGGTGTCCTTCAAGCCTGTTATTGATGTCACCGGAGACTCCAAAGTTCTAAAGAAGATACTGAGAGAAGGGGAAGGTTCCCTAACAGCGAATGAGGGTGCCATGGTGACAATTAGTTATGTAGCTAAGGTAGAACATGGCACAATATTTGAGAAGAAAGGAATTGATGAAACAAAGCCCTTGGAATTCATAACTGATGAAGAACAAGTCATTCCTGGTCTAGATCGAGCAGTGGCTACAATGAAGAAGGGTGAGAAGGCCATTGTAACTATACATCCTGATTATGCATTTGGAAATGTTGAAGCAAGATTTGATTTGGCTACTGTTCCCCCGGGGTCCAATGTAGTCTATGAAGTTGAGATGGTGGACTTTATTAAGGAGAAAGCCCCATGGGAATTAAATAATAGTGAGAAAATTGAGGCAGCTGGGAAGAAGAAAGAAGAAGGAAATCTGTTATTTAAAAATGGCAAGTATCAAAGAGCAGGGAAAAAGTATGACAAGGCTGTTGATTATGTTAGTGAAGATGGATCCTTTGGGGATGATGAGCAAAAGCTAGCTAAGGAACTTAGAGTGTCATGTTGGTTGAATGGTGCAGCGTGTAGCCTCAAACTTAATAACTTTTCAGAAGCAATCAAGTTATGCTCGCAGGTTCTTGATGTTGAGTTCCACAATGTGAAAGCATTGTACAGACGAGCGCAAGCATATATAGAGACTGGGGACTATATTTTGGCAGATGTAGACATAAAACAAGCTCTTGAGGAAGATCCACAGAACAGGGAAGTAAAGTTGCTTCAGAGGAAATTGAAGCAACTTCAACTTGAGAGTGACAAAAGAGATGCTAAACTCTATGCAAATATGTTTGCACATAAAGAGAAAGACTCGTCGGTAGTAACAAAGAGATTGAAGGTTGAGAAAAGCCAGGATGAAAGGAAAGATGAAGAGGTGATGAGAATGGAAGGGGACAAAGTCGCGGACAGTGCAGCTCCTCCCGATACTGATGTTATCAACAATTGA 1800 0.4344 MVAEKASDMSDFENEDDLDEEPGEVIESAPPQKVGEERELNSQLKKKLLKPGHGWETPEFNDEVTVHYVGILLDGTKFDSTRDRGEPVTFTVGQAEVAAGLDRGIVTMKMGEVALFTFPTDSGDEVVNSGNIPSNSVVQFEVELISWIKVVDVCKNGGIIKKIMEKGNRNERPSDLDEVLVKYKATLVDGTTVAETSEEGFEFHVKDGHLFPGLPKVIMTMGRGEKAKLIVQPQYAFGEKEGEAESRVHSIPPNSELHVDVELVSFKPVIDVTGDSKVLKKILREGEGSLTANEGAMVTISYVAKVEHGTIFEKKGIDETKPLEFITDEEQVIPGLDRAVATMKKGEKAIVTIHPDYAFGNVEARFDLATVPPGSNVVYEVEMVDFIKEKAPWELNNSEKIEAAGKKKEEGNLLFKNGKYQRAGKKYDKAVDYVSEDGSFGDDEQKLAKELRVSCWLNGAACSLKLNNFSEAIKLCSQVLDVEFHNVKALYRRAQAYIETGDYILADVDIKQALEEDPQNREVKLLQRKLKQLQLESDKRDAKLYANMFAHKEKDSSVVTKRLKVEKSQDERKDEEVMRMEGDKVADSAAPPDTDVINN 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00972 599 MobiDBLite consensus disorder prediction 1 42 - -
Accr4g00972 599 SUPERFAMILY FKBP-like 156 268 - -
Accr4g00972 599 Coils Coil 523 543 - -
Accr4g00972 599 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 291 383 IPR001179 GO:0003755
Accr4g00972 599 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 56 145 IPR001179 GO:0003755
Accr4g00972 599 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 172 264 IPR001179 GO:0003755
Accr4g00972 599 PANTHER PEPTIDYLPROLYL ISOMERASE 149 268 - -
Accr4g00972 599 SMART tpr_5 453 486 IPR019734 GO:0005515
Accr4g00972 599 SMART tpr_5 404 437 IPR019734 GO:0005515
Accr4g00972 599 SMART tpr_5 487 520 IPR019734 GO:0005515
Accr4g00972 599 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 176 267 IPR001179 GO:0003755
Accr4g00972 599 MobiDBLite consensus disorder prediction 10 24 - -
Accr4g00972 599 Gene3D - 268 391 IPR046357 GO:0003755
Accr4g00972 599 Gene3D - 151 267 IPR046357 GO:0003755
Accr4g00972 599 MobiDBLite consensus disorder prediction 560 599 - -
Accr4g00972 599 FunFam Peptidylprolyl isomerase 268 389 - -
Accr4g00972 599 Gene3D Tetratricopeptide repeat domain 392 547 IPR011990 GO:0005515
Accr4g00972 599 FunFam Peptidylprolyl isomerase 392 547 - -
Accr4g00972 599 ProSiteProfiles TPR repeat profile. 487 520 IPR019734 GO:0005515
Accr4g00972 599 SUPERFAMILY FKBP-like 272 404 - -
Accr4g00972 599 MobiDBLite consensus disorder prediction 560 588 - -
Accr4g00972 599 SUPERFAMILY FKBP-like 33 146 - -
Accr4g00972 599 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 295 387 IPR001179 GO:0003755
Accr4g00972 599 Pfam Tetratricopeptide repeat 466 530 - -
Accr4g00972 599 Gene3D - 32 150 IPR046357 GO:0003755
Accr4g00972 599 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 61 148 IPR001179 GO:0003755
Accr4g00972 599 SUPERFAMILY TPR-like 399 539 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00972 Accr-Chr4 9243977 9249296 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00972 33 550 Calmodulin-binding Proteins AT3G25230 55.385 0.0 562
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00972 K09571 - qsa:O6P43_019033 853.973