Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00961 ATGTCACTCGTCTCCGAACGCAAATATCGCCGCAGCCCTAAAACACTCCCTCCCCTTCCCACTAAAAAACCCGACTATTACGAGCCCCTCCAATCCGAAACTGGCTTTGATGGCGCTTCCTTCTCTGGTGCTGTTTTTAACCTCTCCACCACCGTCGTCGGCGCGGGCATCATGGCTCTTCCCGCCGCCGTCAAACAATTGGGGTTGATTCCGGGCCTTATCATGATTCTTTTTGGAGCTATGTTAACTGAATCCTCCATTGACATACTCCTGAGGTTCACCCGTGTTTCCAAGTCCTCTTCCTATTCCGGCGTTGTTCACGACGCTTTCGGTGACTTTGGCCGCATCCTTCTGCAACTCTGCATTTTCGTTAACAACACGGGAATGCTCATTGTATACATGGTTATTATCGGAGATGTGTTATCGGGAACTTGGTCGGAAGGGGTCCACTATTCGGGGGTGATTGAAGAATGGTTTGGTCAACGTTGGTGGTCCACGCGTTCCGTCTTACTGCTGCTCACGACCCTTTTGATCTTCCTCCCTCTTATATCATTCAAGCGCGTGGATTCATTGAGATACACCTCAGCATTGTCAGTGGGGTTTGCTGTAGTTTTTGTGGCAATAACAGCTGACGTAGTAATTGTTAAGCTGATCAATGGAAGCATTGGAACACCACGATTGATGCCAAAATTCACTGGCCAGGAATCCTTTTGGAAGCTCTTCACAACGATCCCTATTCTAGTCACTGCCTACATCTGCCATCATAATGTTCACCCTATAGAGAATGAACTAAAAGACCCTACCCATATGAAGTTGATAGTTGGGACATCCCTCTCATTATGCTCGACTGTTTATATGGCAACCAGCCTCTTTGGATATTTGTTGTTTGGGGATAAAACACAGGATGATGTACTTGCTAACTTTGATGGCGATCTCGGAGTTCCTTTTGGGTTATTTCTTAATGATATGGTTAGAGTGAGCTATTGCGTTCACCTCATGCTGGTTTTCCCCATTGTATTTTATTCCCTCCGCCTCAACCTAGATGGCCTTTTGTTTCCACATGCCCTTCCCATTGCCTTTGACAGCAGGAGATTCTATTTAGTGACCGCATTTCTCATGTCCTTCATTTTCATTGGAGCCAATTTTGTACCCAGCATCTGGGATGCCTTCCAGTTCACCGGTGCCACTGCAGCCGTTGGTGCTGGATTCATATTCCCTGCCGCTATTGCTCTCAGGGATACTCATGGAGTGGCAACAAAGAAGGACAAGCTATTATCATGGTTGATGATTTTTTTGGCAGTCTCTTCGAGTACCGTAGCCATATCCAGTGACTTGTACAGCTTCTTTAATGGTGAAGAAGCAGCTGTTGGAACCTGA 1377 0.467 MSLVSERKYRRSPKTLPPLPTKKPDYYEPLQSETGFDGASFSGAVFNLSTTVVGAGIMALPAAVKQLGLIPGLIMILFGAMLTESSIDILLRFTRVSKSSSYSGVVHDAFGDFGRILLQLCIFVNNTGMLIVYMVIIGDVLSGTWSEGVHYSGVIEEWFGQRWWSTRSVLLLLTTLLIFLPLISFKRVDSLRYTSALSVGFAVVFVAITADVVIVKLINGSIGTPRLMPKFTGQESFWKLFTTIPILVTAYICHHNVHPIENELKDPTHMKLIVGTSLSLCSTVYMATSLFGYLLFGDKTQDDVLANFDGDLGVPFGLFLNDMVRVSYCVHLMLVFPIVFYSLRLNLDGLLFPHALPIAFDSRRFYLVTAFLMSFIFIGANFVPSIWDAFQFTGATAAVGAGFIFPAAIALRDTHGVATKKDKLLSWLMIFLAVSSSTVAISSDLYSFFNGEEAAVGT 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00961 458 PANTHER AMINO ACID TRANSPORTER 37 436 - -
Accr4g00961 458 Pfam Transmembrane amino acid transporter protein 39 439 IPR013057 -
Accr4g00961 458 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00961 Accr-Chr4 9146008 9149073 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00961 36 450 Amino Acid or Auxin Permease AAAP Family AT5G38820 60.192 0.0 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00961 K14207 - gmx:100814034 660.988