Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00952 ATGATCCGAGAACCAACCCCTTTCGTCCTCCCTAATCTTCAGACTCCTCCTTGCCTCTCTGATAATTCCCCGGGAGCCGCCCCACCTTCCCCCTCTTCATTCCCTGTCCCAATCAGCACCGACGCCGGCGCCGCCGACTCCTCTGTCCTCCTCCTCCACCACCCGCTTCTTTCCAATGACTGTACCCTCTTGGAACTGCACTCTCTCGCTCAAGACTTCGACATGCCCTTCGATGCTTTCTCATCCAATCAGTTCCGCATGTACGAGTTCAAGATCCGCAGGTGTCCACGTGGCGGCCGGACACATGACTGGACCCGCTGTCCCTTTGCCCATCCCGGCGAGAAGGCTCGCCGCAGAGACCCCTGCAGATTCCCCTACTCCGCCACCCCTTGCCCTGACTTCCGCCATGCAAACTGCAAGAAAGGTGACTCCTGCGATTTCGCTCACGGAGTCTTCGAATGTTGGCTTCATCCTTCTCGCTACAGAACTCAACTCTGCAAAGATGCTACCAAATGTCGCCGTCGAGTCTGTTTCTTTGCCCACACTCTCGATCAGTTGCGTGTCCTCACTCGCGCCTCCGTCGAATCAACGGTTGCGTCGCCGATTCGTCGCTCTCTGGATTCATCTAGGACCGGCTCTTCGTTTATCTCGTCACCAACTTCAGTCCTTACGTCATCACTACCTGACAGCTCACCCTTGTCGCCTGGCAATTCCCGGTATGGCGGTGACACATACAATGCGTTGAGTGAAATAGTAACCTCAATGCGCAATATTCAGCTTGATTCGAAGCGGAAGGTTTCTGGTTTTGGTTCTCCCCGTGGTTCGATTGTCCGACCCGGGTTTTCCAGCCTTCAGGTGACCCAGAAGTGGGCAAGAACCCATAAATCTGGACCCGGTTCAGCGGACCTCTGGGACAGCAGCCACGAAGAAGAGGTACCCATGGAAAGAGTGGAATCAGGAAAAGACCTTAGAACCAAAATCTATGCCAAACTCAGCTATGAAAACTCATAG 1011 0.545 MIREPTPFVLPNLQTPPCLSDNSPGAAPPSPSSFPVPISTDAGAADSSVLLLHHPLLSNDCTLLELHSLAQDFDMPFDAFSSNQFRMYEFKIRRCPRGGRTHDWTRCPFAHPGEKARRRDPCRFPYSATPCPDFRHANCKKGDSCDFAHGVFECWLHPSRYRTQLCKDATKCRRRVCFFAHTLDQLRVLTRASVESTVASPIRRSLDSSRTGSSFISSPTSVLTSSLPDSSPLSPGNSRYGGDTYNALSEIVTSMRNIQLDSKRKVSGFGSPRGSIVRPGFSSLQVTQKWARTHKSGPGSADLWDSSHEEEVPMERVESGKDLRTKIYAKLSYENS 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00952 336 Gene3D - 125 188 - -
Accr4g00952 336 PANTHER UNKEMPT FAMILY MEMBER 73 336 IPR045234 -
Accr4g00952 336 MobiDBLite consensus disorder prediction 11 39 - -
Accr4g00952 336 MobiDBLite consensus disorder prediction 294 318 - -
Accr4g00952 336 SMART c3hfinal6 160 183 IPR000571 GO:0046872
Accr4g00952 336 SMART c3hfinal6 125 151 IPR000571 GO:0046872
Accr4g00952 336 MobiDBLite consensus disorder prediction 304 318 - -
Accr4g00952 336 ProSiteProfiles Zinc finger C3H1-type profile. 125 152 IPR000571 GO:0046872
Accr4g00952 336 MobiDBLite consensus disorder prediction 200 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00952 Accr-Chr4 9066884 9067894 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00952 74 189 C2H2 Transcription Factor Family AT5G12850 61.207 2.41e-49 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Accr4g00952 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00952 - - pcin:129298135 500.36